- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 1E6: 6-({2-[(5-chloro-4-{[(2S)-2,3-dihydroxypropyl]oxy}-2-methoxyphenyl)amino]-2-oxoethyl}sulfanyl)pyridine-3-carboxylic acid(Non-covalent)
- 4 x 1E5: 6-[3-(carboxymethoxy)-5-fluorophenyl]pyridine-3-carboxylic acid(Non-covalent)
1E5.2: 13 residues within 4Å:- Chain A: G.28, A.29, V.30, T.94, V.135, S.136, N.137, L.164, R.168, A.237, T.247, I.251
- Ligands: 1E6.1
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:V.30, A:V.135, A:I.251
- Hydrogen bonds: A:G.28, A:V.30, A:T.94
- Water bridges: A:G.31, A:T.247
- Salt bridges: A:R.168
1E5.4: 12 residues within 4Å:- Chain B: G.28, A.29, V.30, T.94, V.135, S.136, N.137, L.164, R.168, A.237, T.247
- Ligands: 1E6.3
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:V.30, B:V.135
- Hydrogen bonds: B:G.28, B:A.29, B:V.30, B:T.247
- Water bridges: B:G.31, B:G.31
- Salt bridges: B:R.168
1E5.6: 12 residues within 4Å:- Chain C: G.28, A.29, V.30, T.94, V.135, S.136, N.137, L.164, R.168, A.237, T.247
- Ligands: 1E6.5
9 PLIP interactions:9 interactions with chain C- Hydrophobic interactions: C:V.30, C:V.30, C:V.135
- Hydrogen bonds: C:G.28, C:V.30, C:T.247, C:T.247
- Water bridges: C:G.31
- Salt bridges: C:R.168
1E5.8: 12 residues within 4Å:- Chain D: G.28, A.29, V.30, T.94, V.135, S.136, N.137, L.164, R.168, A.237, T.247
- Ligands: 1E6.7
8 PLIP interactions:8 interactions with chain D- Hydrophobic interactions: D:V.30, D:V.135
- Hydrogen bonds: D:A.29, D:V.30, D:T.247
- Water bridges: D:G.31, D:G.31
- Salt bridges: D:R.168
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kohlmann, A. et al., Fragment growing and linking lead to novel nanomolar lactate dehydrogenase inhibitors. J.Med.Chem. (2013)
- Release Date
- 2013-01-23
- Peptides
- L-lactate dehydrogenase A chain: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 1E6: 6-({2-[(5-chloro-4-{[(2S)-2,3-dihydroxypropyl]oxy}-2-methoxyphenyl)amino]-2-oxoethyl}sulfanyl)pyridine-3-carboxylic acid(Non-covalent)
- 4 x 1E5: 6-[3-(carboxymethoxy)-5-fluorophenyl]pyridine-3-carboxylic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kohlmann, A. et al., Fragment growing and linking lead to novel nanomolar lactate dehydrogenase inhibitors. J.Med.Chem. (2013)
- Release Date
- 2013-01-23
- Peptides
- L-lactate dehydrogenase A chain: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H