SMTL ID : 4ihi.3 (2 other biounits)

Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis bound with NAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 26 residues within 4Å: Chain A: Y.204, I.206, T.207, P.208, F.209, N.210, I.214, K.232, P.233, S.234, D.264, G.265, F.266, S.269, F.283, T.284, G.285, S.286, T.289, H.292, E.313, T.314, G.315, C.347, F.447, L.476 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.214, A:T.284 Hydrogen bonds: A:T.207, A:F.209, A:K.232, A:S.269, A:S.286, A:T.289, A:H.292, A:E.313, A:K.529 Water bridges: A:K.232, A:S.234, A:G.315, A:R.393 NAD.2: 26 residues within 4Å: Chain B: Y.204, I.206, T.207, P.208, F.209, N.210, I.214, K.232, P.233, S.234, D.264, G.265, F.266, S.269, F.283, T.284, G.285, S.286, T.289, H.292, E.313, T.314, G.315, C.347, F.447, L.476 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:I.214, B:T.284 Hydrogen bonds: B:Y.204, B:T.207, B:F.209, B:K.232, B:S.269, B:S.286, B:H.292, B:E.313, B:K.529 Water bridges: B:K.232, B:S.234, B:G.315, B:R.393

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lagautriere, T. et al., Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies. Acta Crystallogr.,Sect.D (2014)

Release Date

2013-12-18

Peptides

Delta-1-pyrroline-5-carboxylate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Delta-1-pyrroline-5-carboxylate dehydrogenase

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