SMTL ID : 4lem.1 (3 other biounits)

Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

homo-dimer

Ligands

2 x B12: COBALAMIN(Non-covalent)

B12.1: 8 residues within 4Å: Chain A: I.206, F.266, D.270, F.283, A.288, T.289, H.292, R.393 15 PLIP interactions: 14 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:I.206, A:F.266, A:F.266, A:F.266, A:F.283, A:T.289 Hydrogen bonds: A:F.266, A:A.288 Water bridges: A:S.269, A:S.269, A:T.289, A:T.289, A:R.393, A:R.393 Metal complexes: B12.1 B12.2: 8 residues within 4Å: Chain B: I.206, F.266, D.270, F.283, A.288, T.289, H.292, R.393 16 PLIP interactions: 15 interactions with chain B, 1 Ligand-Ligand interactions Hydrophobic interactions: B:I.206, B:F.266, B:F.266, B:F.283, B:T.289 Hydrogen bonds: B:F.266, B:A.288 Water bridges: B:S.269, B:S.269, B:T.289, B:T.289, B:T.289, B:R.393, B:R.393 pi-Stacking: B:F.266 Metal complexes: B12.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lagautriere, T. et al., Use of a "silver bullet" to resolve crystal lattice dislocation disorder: A cobalamin complex of Delta (1)-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis. J.Struct.Biol. (2015)

Release Date

2014-05-14

Peptides

1-pyrroline-5-carboxylate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

1-pyrroline-5-carboxylate dehydrogenase

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