SMTL ID : 4jgn.1

Crystal structure of RNA silencing suppressor p19 with 1nt-5'-overhanging double-helical RNA 20mer pUUG(CUG)5CU

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.6, F.48, R.50 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.6, A:S.6 Water bridges: A:K.49, A:R.50, A:R.50, A:R.50, A:R.50 Salt bridges: A:R.50 SO4.2: 1 residues within 4Å: Chain A: S.16 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.16 Water bridges: A:W.17 SO4.3: 3 residues within 4Å: Chain C: S.6, F.48, R.50 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:S.6, C:S.6 Water bridges: C:K.49, C:R.50, C:R.50 Salt bridges: C:R.50 SO4.4: 1 residues within 4Å: Chain C: S.16 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:S.16 Water bridges: C:W.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Katorcha, E. et al., Procrustean bed of RNA silencing suppression. To be Published

Release Date

2014-03-05

Peptides

RNA silencing suppressor p19: AC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

RNA silencing suppressor p19

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