SMTL ID : 4ktg.1

Crystal structure of double-helical GGC-repetitive RNA 19mer complexed with RSS p19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.6, F.48, R.50 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.6, A:S.6 Water bridges: A:K.49, A:R.50 Salt bridges: A:R.50 SO4.2: 2 residues within 4Å: Chain A: S.16, T.18 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.16 Water bridges: A:W.17 SO4.3: 4 residues within 4Å: Chain A: Q.31, R.93, R.95, G.96 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.31, A:Q.31, A:G.96 Salt bridges: A:R.93 SO4.4: 3 residues within 4Å: Chain D: S.6, F.48, R.50 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:S.6, D:S.6 Water bridges: D:K.49, D:R.50 Salt bridges: D:R.50 SO4.5: 2 residues within 4Å: Chain D: S.16, T.18 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.16 Water bridges: D:W.17 SO4.6: 4 residues within 4Å: Chain D: Q.31, R.93, R.95, G.96 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Q.31, D:Q.31, D:G.96 Salt bridges: D:R.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tamjar, J. et al., Structural insights into CNG-repetitive RNAs associated with human Trinucleotide Repeat Expansion Diseases (TREDs). To be published

Release Date

2014-05-21

Peptides

RNA silencing suppressor p19: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

RNA silencing suppressor p19

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