SMTL ID : 4kub.1 (1 other biounit)

Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 20 residues within 4Å: Chain A: E.27, Y.30, C.31, M.83, M.84, V.85, R.90, G.91, L.92, G.93, V.94, A.95, R.96, N.123, A.125, L.128, L.129, Y.130, Q.132 Ligands: EDO.9 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:A.95 Hydrogen bonds: A:M.83, A:V.85, A:G.91, A:G.93, A:G.93, A:V.94, A:A.95, A:R.96, A:N.123, A:L.128 Water bridges: A:A.89, A:L.92, A:R.96, A:R.96, A:R.96, A:Q.132, A:Q.132 Salt bridges: A:R.96

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.143, H.144 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.144 Water bridges: A:E.142 Salt bridges: A:H.144 SO4.3: 2 residues within 4Å: Chain A: R.52, G.53 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.53 Water bridges: A:R.52, A:Q.109, A:Q.109 SO4.4: 2 residues within 4Å: Chain A: Q.136, R.138 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.138 SO4.5: 2 residues within 4Å: Chain A: R.52, W.72 2 PLIP interactions: 2 interactions with chain A Water bridges: A:W.72 Salt bridges: A:R.52 SO4.6: 3 residues within 4Å: Chain A: A.141, R.143, Q.155 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.155 Water bridges: A:E.142, A:R.143, A:R.143, A:R.143, A:R.143, A:Q.155 Salt bridges: A:R.143

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 4 residues within 4Å: Chain A: H.74, G.75, K.111, R.113 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.74, A:R.113, A:R.113 EDO.8: 5 residues within 4Å: Chain A: R.25, D.26, F.29, D.145, P.146 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.25, A:D.145 EDO.9: 2 residues within 4Å: Chain A: G.91 Ligands: COA.1 No protein-ligand interaction detected (PLIP) EDO.10: 3 residues within 4Å: Chain A: Y.30, P.33, S.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.30 Water bridges: A:N.82, A:N.82 EDO.11: 6 residues within 4Å: Chain A: Y.70, Q.71, A.79, K.116, I.117, S.118 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.71, A:Q.71, A:I.117 Water bridges: A:Q.155, A:Q.155 EDO.12: 4 residues within 4Å: Chain A: A.10, E.11, T.12, L.15 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Majorek, K.A. et al., Structural, functional, and inhibition studies of a Gcn5-related N-acetyltransferase (GNAT) superfamily protein PA4794: a new C-terminal lysine protein acetyltransferase from pseudomonas aeruginosa. J.Biol.Chem. (2013)

Release Date

2013-06-05

Peptides

GNAT superfamily acetyltransferase PA4794: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GNAT superfamily acetyltransferase PA4794

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