SMTL ID : 4laj.3 (3 other biounits)

Crystal structure of HIV-1 YU2 envelope gp120 glycoprotein in complex with CD4-mimetic miniprotein, M48U1, and llama single-domain, broadly neutralizing, co-receptor binding site antibody, JM4

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.14 Å
Oligo State
hetero-1-1-1-mer
Ligands
9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Acharya, P. et al., Heavy Chain-Only IgG2b Llama Antibody Effects Near-Pan HIV-1 Neutralization by Recognizing a CD4-Induced Epitope That Includes Elements of Coreceptor- and CD4-Binding Sites. J.Virol. (2013)
Release Date
2013-08-14
Peptides
HIV-1 YU2 gp120 envelope glycoprotein: A
CD4-mimetic miniprotein M48U1: B
Llama single domain antibody, JM4: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
D
C
L

HIV-1 YU2 gp120 envelope glycoprotein

CD4-mimetic miniprotein M48U1

Llama single domain antibody, JM4

Related Entries With Identical Sequence

4jzw.1 | 4jzw.2 | 4jzz.1 | 4k0a.1 | 4ka2.1 | 4laj.1 | 4laj.2 | 4laj.4 | 4r4f.1 | 4r4n.1 | 4r4n.2 | 4r4n.3 | 4r4n.4 | 4r4n.5 | 4r4n.6 | 4r4n.7 | 4r4n.8 | 4rfo.1 | 4rwy.1 | 5kjr.1 | 5w4l.1 | 5w4l.2 | 6mfp.1 | 6mfp.2 | 6mg7.1 | 6w4m.1 | 7lok.1 | 7n8q.1