SMTL ID : 4ll7.1 (3 other biounits)

Structure of She3p amino terminus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

homo-dimer

Ligands

7 x DY: DYSPROSIUM ION(Non-covalent)

DY.1: 2 residues within 4Å: Chain A: E.84, E.87 No protein-ligand interaction detected (PLIP) DY.2: 2 residues within 4Å: Chain A: K.69, E.72 No protein-ligand interaction detected (PLIP) DY.3: 2 residues within 4Å: Chain A: E.55, E.62 No protein-ligand interaction detected (PLIP) DY.4: 1 residues within 4Å: Chain A: D.74 No protein-ligand interaction detected (PLIP) DY.13: 2 residues within 4Å: Chain B: E.84, E.87 No protein-ligand interaction detected (PLIP) DY.14: 1 residues within 4Å: Chain B: E.72 No protein-ligand interaction detected (PLIP) DY.15: 1 residues within 4Å: Chain B: D.74 No protein-ligand interaction detected (PLIP)

13 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 1 residues within 4Å: Chain A: N.80 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.80 SO4.6: 1 residues within 4Å: Chain A: R.81 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.81 SO4.7: 2 residues within 4Å: Chain A: Q.85, K.88 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.85, A:Q.85 Salt bridges: A:K.88 SO4.8: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.9: 4 residues within 4Å: Chain A: K.67, E.70, L.71, D.74 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.67, A:L.71 SO4.10: 1 residues within 4Å: Chain A: Q.21 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.21 SO4.16: 2 residues within 4Å: Chain B: N.56, I.60 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.56 SO4.17: 1 residues within 4Å: Chain B: R.81 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.81 SO4.18: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.19: 3 residues within 4Å: Chain B: R.63, K.64 Ligands: SO4.20 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.63, B:K.64 SO4.20: 3 residues within 4Å: Chain B: R.63, K.67 Ligands: SO4.19 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.63, B:K.64, B:K.67 SO4.21: 1 residues within 4Å: Chain B: R.63 No protein-ligand interaction detected (PLIP) SO4.22: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x PT: PLATINUM (II) ION(Non-covalent)

PT.11: 1 residues within 4Å: Chain A: M.89 No protein-ligand interaction detected (PLIP) PT.23: 1 residues within 4Å: Chain B: M.89 No protein-ligand interaction detected (PLIP)

1 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)

DTT.12: 4 residues within 4Å: Chain A: N.80, R.81, N.83, E.84 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.80, A:N.83, A:E.84 Water bridges: A:E.77

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.24: 2 residues within 4Å: Chain B: S.76, N.80 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, H. et al., Structure of a myosinbulletadaptor complex and pairing by cargo. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-02-12

Peptides

SWI5-dependent HO expression protein 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

SWI5-dependent HO expression protein 3

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