SMTL ID : 4ll7.4 (3 other biounits)

Structure of She3p amino terminus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

homo-dimer

Ligands

5 x DY: DYSPROSIUM ION(Non-covalent)

DY.1: 1 residues within 4Å: Chain A: D.74 No protein-ligand interaction detected (PLIP) DY.2: 2 residues within 4Å: Chain A: E.84, E.87 No protein-ligand interaction detected (PLIP) DY.3: 1 residues within 4Å: Chain A: E.62 No protein-ligand interaction detected (PLIP) DY.9: 1 residues within 4Å: Chain B: D.74 No protein-ligand interaction detected (PLIP) DY.10: 1 residues within 4Å: Chain B: E.87 No protein-ligand interaction detected (PLIP)

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: Q.85, K.88 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.85 Salt bridges: A:K.88 SO4.11: 1 residues within 4Å: Chain B: R.81 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.81 SO4.12: 2 residues within 4Å: Chain B: R.63, K.64 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.63 Salt bridges: B:R.63, B:K.64 SO4.13: 1 residues within 4Å: Ligands: SO4.16 No protein-ligand interaction detected (PLIP) SO4.14: 2 residues within 4Å: Chain B: D.74, E.77 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.77 SO4.15: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.16: 1 residues within 4Å: Ligands: SO4.13 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 5 residues within 4Å: Chain A: N.56, S.59, I.60, R.63 Ligands: IPA.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.56, A:S.59, A:R.63

3 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.6: 5 residues within 4Å: Chain A: N.52, E.55, N.56 Ligands: EDO.5, IPA.7 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.55, A:N.56 Hydrogen bonds: A:N.52 IPA.7: 2 residues within 4Å: Chain A: N.52 Ligands: IPA.6 No protein-ligand interaction detected (PLIP) IPA.8: 3 residues within 4Å: Chain A: D.74, E.77, L.78 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.78

1 x PT: PLATINUM (II) ION(Non-covalent)

PT.17: 3 residues within 4Å: Chain B: Q.85, K.86, M.89 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, H. et al., Structure of a myosinbulletadaptor complex and pairing by cargo. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-02-12

Peptides

SWI5-dependent HO expression protein 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
G

SWI5-dependent HO expression protein 3

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