SMTL ID : 4lv5.3 (2 other biounits)

Murine IRGa6 bound to Toxoplasma ROP5B, a pseudokinase GDI

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 15 residues within 4Å: Chain A: E.87, T.88, G.89, S.90, G.91, K.92, S.93, S.94, T.112, K.194, D.196, S.197, S.241, N.242, K.243 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.89, A:S.90, A:G.91, A:K.92, A:S.93, A:S.93, A:S.94, A:S.94, A:G.113, A:K.194, A:S.241, A:N.242, A:N.242, A:K.243, A:K.243 Water bridges: A:N.104, A:T.112, A:D.136, A:S.197 Salt bridges: A:D.196

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: Y.33, K.289, F.380, L.387, Y.402 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.33, A:R.285, A:K.289 EDO.3: 2 residues within 4Å: Chain A: I.304, T.309 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reese, M.L. et al., Murine IRGa6 bound to Toxoplasma ROP5B, a pseudokinase GDI. To be Published

Release Date

2013-09-25

Peptides

Interferon-inducible GTPase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Interferon-inducible GTPase 1

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