SMTL ID : 4mdk.4 (3 other biounits)

Cdc34-ubiquitin-CC0651 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

hetero-1-1-mer

Ligands

1 x U94: 4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acid(Non-covalent)

U94.1: 17 residues within 4Å: Chain A: F.24, I.41, F.42, G.43, P.44, N.46, T.47, Y.48, Y.49, F.54, I.124, L.127, N.128, Y.144, W.147, Y.157 Chain B: G.51 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.41, A:P.44, A:T.47, A:Y.49, A:Y.49, A:L.127 Hydrogen bonds: A:Y.48, A:Y.49 Water bridges: A:Y.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, H. et al., E2 enzyme inhibition by stabilization of a low-affinity interface with ubiquitin. Nat.Chem.Biol. (2014)

Release Date

2013-12-11

Peptides

Ubiquitin-conjugating enzyme E2 R1: A
Ubiquitin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
H

Ubiquitin-conjugating enzyme E2 R1

Ubiquitin

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