SMTL ID : 4mjo.1 (1 other biounit)

Human liver fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate, 1-phosphohydrolase) (e.c.3.1.3.11) complexed with the allosteric inhibitor 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-tetramer

Ligands

4 x 2C1: N-({4-bromo-6-[(methylcarbamoyl)amino]pyridin-2-yl}carbamoyl)-5-(2-methoxyethyl)-4-methylthiophene-2-sulfonamide(Non-covalent)

2C1.1: 16 residues within 4Å: Chain A: V.18, M.19, E.21, G.22, R.23, R.26, G.27, T.28, G.29, E.30, L.31, T.32, V.161, M.178 Chain C: T.28 Ligands: 2C1.3 16 PLIP interactions: 1 interactions with chain C, 15 interactions with chain A Hydrogen bonds: C:T.28, A:G.27, A:G.27, A:G.27, A:G.27, A:T.28, A:G.29, A:L.31, A:T.32, A:T.32 Hydrophobic interactions: A:V.18, A:R.23, A:L.31 Water bridges: A:R.23, A:E.30, A:E.30 2C1.2: 19 residues within 4Å: Chain B: V.18, M.19, E.21, G.22, R.23, A.25, R.26, G.27, T.28, G.29, E.30, L.31, T.32, V.161, M.178 Chain D: G.27, T.28, G.29 Ligands: 2C1.4 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:E.21, B:R.23, B:L.31 Hydrogen bonds: B:G.27, B:G.27, B:G.27, B:G.27, B:T.28, B:G.29, B:L.31, B:T.32, B:T.32, D:T.28 Water bridges: B:E.30, B:Y.114 2C1.3: 18 residues within 4Å: Chain A: G.27, T.28, G.29 Chain C: V.18, M.19, G.22, R.23, A.25, R.26, G.27, T.28, G.29, E.30, L.31, T.32, M.178, D.179 Ligands: 2C1.1 15 PLIP interactions: 14 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:V.18, C:L.31 Hydrogen bonds: C:G.27, C:G.27, C:G.27, C:G.27, C:T.28, C:G.29, C:L.31, C:T.32, C:T.32, A:T.28 Water bridges: C:E.30, C:E.30, C:D.179 2C1.4: 17 residues within 4Å: Chain B: T.28, G.29 Chain D: V.18, M.19, E.21, G.22, R.23, A.25, R.26, G.27, T.28, G.29, E.30, L.31, T.32, M.178 Ligands: 2C1.2 16 PLIP interactions: 15 interactions with chain D, 1 interactions with chain B Hydrophobic interactions: D:V.18, D:R.23, D:A.25, D:L.31 Hydrogen bonds: D:G.27, D:G.27, D:G.27, D:G.27, D:T.28, D:G.29, D:L.31, D:T.32, D:T.32, B:T.28 Water bridges: D:E.30, D:E.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cubrilovic, D. et al., Determination of protein-ligand binding constants of a cooperatively regulated tetrameric enzyme using electrospray mass spectrometry. Acs Chem.Biol. (2014)

Release Date

2013-11-06

Peptides

Fructose-1,6-bisphosphatase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fructose-1,6-bisphosphatase 1

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