SMTL ID : 4msv.1

Crystal structure of FASL and DcR3 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-3-3-mer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: C.103, P.104, P.105, A.107, S.130, S.132 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.103, A:A.107, A:S.130, A:S.132, H2O.1 MG.3: 6 residues within 4Å: Chain C: C.103, P.104, P.105, A.107, S.130, S.132 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.103, C:A.107, C:S.130, C:S.132, H2O.4 MG.5: 6 residues within 4Å: Chain E: C.103, P.104, P.105, A.107, S.130, S.132 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:C.103, E:A.107, E:S.130, E:S.132, H2O.6

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: L.56, R.60 Chain B: M.84, R.85, N.86, Y.89, Q.91, D.92, L.93 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.86, B:N.86, B:Q.91, A:R.60 GOL.4: 9 residues within 4Å: Chain C: L.56, R.60 Chain D: M.84, R.85, N.86, Y.89, Q.91, D.92, L.93 4 PLIP interactions: 3 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:N.86, D:N.86, D:Q.91, C:R.60 GOL.6: 9 residues within 4Å: Chain E: L.56, R.60 Chain F: M.84, R.85, N.86, Y.89, Q.91, D.92, L.93 4 PLIP interactions: 3 interactions with chain F, 1 interactions with chain E Hydrogen bonds: F:N.86, F:N.86, F:Q.91, E:R.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3. Structure (2016)

Release Date

2013-11-27

Peptides

Tumor necrosis factor receptor superfamily member 6B: ACE
Tumor necrosis factor ligand superfamily member 6: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
B

E
B

B
A

D
A

F
A

Tumor necrosis factor receptor superfamily member 6B

Tumor necrosis factor ligand superfamily member 6

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