SMTL ID : 4nrb.1

Crystal Structure of the bromodomain of human BAZ2B in complex with compound-1 N01197

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x 2LX: N-methyl-2-(tetrahydro-2H-pyran-4-yloxy)benzamide(Non-covalent)

2LX.1: 9 residues within 4Å: Chain A: W.32, P.33, F.34, V.38, V.43, Y.46, F.88, N.89, I.95 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.43, A:F.88, A:F.88 Hydrogen bonds: A:P.33, A:N.89

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: M.54, T.58, K.62 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.62 Water bridges: A:P.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferguson, F.M. et al., Targeting low-druggability bromodomains: fragment based screening and inhibitor design against the BAZ2B bromodomain. J.Med.Chem. (2013)

Release Date

2013-12-25

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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