SMTL ID : 4p5m.3 (3 other biounits)

Structural Basis of Chronic Beryllium Disease: Bridging the Gap Between Allergic Hypersensitivity and Autoimmunity

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- NAG- BMA: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-mannopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG-BMA.1: 2 residues within 4Å: Chain B: F.41, N.42 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: V.116, N.118, E.166, H.167, W.168 5 PLIP interactions: 5 interactions with chain A Water bridges: A:N.118, A:N.118, A:N.118, A:E.166, A:H.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clayton, G.M. et al., Structural basis of chronic beryllium disease: linking allergic hypersensitivity and autoimmunity. Cell (2014)

Release Date

2014-08-27

Peptides

HLA class II histocompatibility antigen, DP alpha 1 chain: A
peptide,HLA class II histocompatibility antigen, DP beta 1 chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

HLA class II histocompatibility antigen, DP alpha 1 chain

peptide,HLA class II histocompatibility antigen, DP beta 1 chain

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