SMTL ID : 4p8h.1 (1 other biounit)

Crystal structure of M. tuberculosis DprE1 in complex with the nitro-benzothiazole 6a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: W.36, I.72, A.73, R.74, G.75, L.76, G.77, R.78, S.79, Y.80, N.83, A.84, M.94, A.114, P.136, G.137, T.138, V.141, T.142, G.144, G.145, A.148, C.149, I.151, H.152, N.198, G.199, G.202, I.203, I.204, Y.435, A.437 Ligands: O95.2 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:W.36, A:R.78, A:T.138 Hydrogen bonds: A:G.75, A:L.76, A:G.77, A:R.78, A:S.79, A:S.79, A:N.83, A:N.83, A:G.137, A:T.142, A:H.152, A:H.152, A:N.198, A:I.204, A:I.204 pi-Cation interactions: A:K.438, A:K.438

1 x O95: {(4S)-2-[7-(hydroxyamino)-6-methyl-5-(trifluoromethyl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-oxazol-4-yl}(pyrrolidin-1-yl)methanone(Covalent)

O95.2: 12 residues within 4Å: Chain A: G.137, H.152, G.153, W.250, Y.334, Q.356, V.385, K.387, N.405, C.407, K.438 Ligands: FAD.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.250, A:V.385 Halogen bonds: A:N.405

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Neres, J. et al., Non-mutagenic Nitrobenzothiazoles as Novel Anti-tubercular Agents: A Balance between Potency and Electron Affinity. To Be Published

Release Date

2015-10-28

Peptides

Probable decaprenylphosphoryl-beta-D-ribose oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable decaprenylphosphoryl-beta-D-ribose oxidase

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