SMTL ID : 4qbk.1

Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with amino acyl-tRNA analogue at 1.77 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: D.95, E.96, L.97, H.112, G.113, G.114, H.115 Ligands: 3NZ.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.95, A:L.97, A:D.98

1 x 3NZ: 3'-deoxy-3'-[(O-methyl-L-tyrosyl)amino]adenosine(Non-covalent)

3NZ.2: 15 residues within 4Å: Chain A: N.12, Y.17, H.22, M.69, N.70, L.97, G.113, G.114, H.115, N.116, V.147, S.148, V.151, L.152 Ligands: GOL.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.12, A:M.69, A:N.70, A:N.70, A:G.113, A:N.116, A:N.116, A:S.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, A. et al., Structural and binding studies of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa provide a platform for the structure-based inhibitor design against peptidyl-tRNA hydrolase. Biochem.J. (2014)

Release Date

2014-05-28

Peptides

Peptidyl-tRNA hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-tRNA hydrolase

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