SMTL ID : 4qbz.1

Crystal structure of human TLR8 in complex with DS-802

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-dimer
Ligands
1 x NAG- NAG- BMA- MAN- BMA: alpha-D-mannopyranose-(2-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
11 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x D80: 2-butyl[1,3]oxazolo[4,5-c]quinolin-4-amine(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yoo, E. et al., Determinants of Activity at Human Toll-like Receptors 7 and 8: Quantitative Structure-Activity Relationship (QSAR) of Diverse Heterocyclic Scaffolds. J.Med.Chem. (2014)
Release Date
2014-10-22
Peptides
Toll-like receptor 8: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Toll-like receptor 8

Related Entries With Identical Sequence

3w3g.1 | 3w3j.1 | 3w3k.1 | 3w3l.1 | 3w3l.2 | 3w3m.1 | 3w3n.1 | 3wn4.1 | 3wn4.2 | 4qc0.1 | 4r07.1 | 4r07.2 | 4r08.1 | 4r08.2 | 4r09.1 | 4r09.2 | 4r0a.1 | 4r6a.1 | 5awa.1 | 5awb.1 | 5awc.1 | 5awc.2 | 5awd.1 | 5az5.1 | 5az5.2 | 5wyx.1 | 5wyz.1 | 5z14.1 | 5z15.1 | 6kya.1  more...