SMTL ID : 4r26.1

Crystal structure of human Fab PGT124, a broadly neutralizing and potent HIV-1 neutralizing antibody

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-oligomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Q.32, I.40, P.54, F.57, G.79, D.80 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.32, A:G.79 Water bridges: A:K.34 GOL.2: 5 residues within 4Å: Chain A: T.106, L.108, Y.142, G.144, Y.174 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.144 Water bridges: A:Y.174 GOL.3: 3 residues within 4Å: Chain A: L.10, G.11, E.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.11, A:E.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garces, F. et al., Structural Evolution of Glycan Recognition by a Family of Potent HIV Antibodies. Cell(Cambridge,Mass.) (2014)

Release Date

2014-10-08

Peptides

PGR124-Light Chain: A
PGT124-Heavy Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

PGR124-Light Chain

PGT124-Heavy Chain

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