SMTL ID : 4r2g.4 (3 other biounits)

Crystal Structure of PGT124 Fab bound to HIV-1 JRCSF gp120 core and to CD4

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.28 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x GOL: GLYCEROL(Non-functional Binders)
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Garces, F. et al., Structural Evolution of Glycan Recognition by a Family of Potent HIV Antibodies. Cell(Cambridge,Mass.) (2014)
Release Date
2014-10-08
Peptides
T-cell surface glycoprotein CD4: A
PGT124 Light Chain: B
PGT124 Heavy Chain: C
Surface protein gp160: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
L
B
M
C
N
D
A

T-cell surface glycoprotein CD4

PGT124 Light Chain

PGT124 Heavy Chain

Surface protein gp160

Related Entries With Identical Sequence

2nxy.1 | 2nxz.1 | 2ny0.1 | 2ny1.1 | 2ny2.1 | 2ny3.1 | 2ny4.1 | 2ny5.1 | 2ny6.1 | 3jwd.1 | 3jwd.2 | 3jwo.1 | 4r26.1 | 4r2g.1 | 4r2g.2 | 4r2g.3 | 5t3s.1 | 5um8.1 | 6ce0.1 | 6ieq.1 | 6mco.1 | 6mdt.1 | 7kmd.1