SMTL ID : 4u70.1

HsMetAP (F309M) in complex with (1-amino-2-cyclohexylethyl)phosphonic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 7 residues within 4Å: Chain A: D.140, T.142, D.151, E.247, E.278 Ligands: CO.2, Q04.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.140, A:D.140, A:D.151, A:E.278 CO.2: 7 residues within 4Å: Chain A: D.151, H.214, T.245, E.247, E.278 Ligands: CO.1, Q04.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.151, A:H.214, A:E.247, A:E.278

1 x K: POTASSIUM ION(Non-covalent)

K.3: 4 residues within 4Å: Chain A: V.117, N.118, V.120, S.274 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.118, A:V.120, A:S.274, H2O.5

1 x Q04: [(1R)-1-amino-2-cyclohexylethyl]phosphonic acid(Non-covalent)

Q04.4: 15 residues within 4Å: Chain A: P.103, Y.106, F.109, C.114, H.123, D.140, T.142, D.151, H.214, M.220, H.221, E.247, E.278 Ligands: CO.1, CO.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:P.103, A:Y.106, A:F.109, A:F.109 Hydrogen bonds: A:E.247 Water bridges: A:T.142, A:T.142, A:N.153, A:Q.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arya, T. et al., Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases. J.Med.Chem. (2015)

Release Date

2015-03-25

Peptides

Methionine aminopeptidase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine aminopeptidase 1

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