SMTL ID : 4unq.1 (1 other biounit)

Mtb TMK in complex with compound 36

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x H6D: 4-[(R)-methylsulfinyl]-2-oxo-6-[3-(trifluoromethoxy)phenyl]-1,2-dihydropyridine-3-carbonitrile(Non-covalent)

H6D.1: 16 residues within 4Å: Chain A: F.36, P.37, Y.39, L.52, V.63, M.66, A.67, F.70, R.74, R.95, S.99, N.100, Y.103, S.104, R.107, L.171 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:M.66, A:F.70, A:Y.103 Hydrogen bonds: A:R.74, A:R.74, A:N.100 Water bridges: A:R.95 pi-Cation interactions: A:F.70, A:Y.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Naik, M. et al., Structure Guided Lead Generation for M. Tuberculosis Thymidylate Kinase (Mtb Tmk): Discovery of 3-Cyanopyridone and 1,6-Naphthyridin-2-One as Potent Inhibitors. J.Med.Chem. (2015)

Release Date

2015-06-24

Peptides

THYMIDYLATE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

THYMIDYLATE KINASE

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