SMTL ID : 4wrs.1

Crystal structure of human Pim-1 kinase in complex with an azaspiro pyrazinyl-indazole inhibitor.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: D.89, W.90, F.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.90 GOL.2: 4 residues within 4Å: Chain A: P.104, E.105, D.157, R.160 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.105, A:R.160, A:R.160

1 x 3U1: 3-{6-[(4R)-6-azaspiro[2.5]oct-4-yloxy]pyrazin-2-yl}-5-(2,6-difluorophenyl)-1H-indazole(Non-covalent)

3U1.3: 15 residues within 4Å: Chain A: L.25, G.26, F.30, A.46, K.48, I.85, L.101, E.102, R.103, V.107, D.109, E.152, L.155, I.166, D.167 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.25, A:F.30, A:A.46, A:R.103, A:V.107, A:L.155 Hydrogen bonds: A:E.102 Water bridges: A:E.152, A:D.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H.L. et al., The discovery of novel 3-(pyrazin-2-yl)-1H-indazoles as potent pan-Pim kinase inhibitors. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-02-04

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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