SMTL ID : 4wvy.3 (2 other biounits)

Double-heterohexameric rings of full-length Rvb1(ATP)/Rvb2(apo)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.64 Å

Oligo State

hetero-3-3-mer

Ligands

3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 21 residues within 4Å: Chain A: A.18, H.19, I.22, G.39, F.40, V.41, G.72, P.73, G.74, T.75, G.76, K.77, T.78, A.79, D.303, Y.367, I.375, R.379, L.404, R.405, L.408 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:A.18, A:V.41, A:G.74, A:T.75, A:G.76, A:G.76, A:K.77, A:T.78, A:T.78, A:A.79, A:D.303, A:Y.367, A:R.379, A:R.379 Salt bridges: A:H.19, A:K.77, A:R.405, A:R.405, A:R.405 ATP.2: 21 residues within 4Å: Chain C: A.18, H.19, I.22, G.39, F.40, V.41, G.72, P.73, G.74, T.75, G.76, K.77, T.78, A.79, D.303, Y.367, I.375, R.379, L.404, R.405, L.408 19 PLIP interactions: 19 interactions with chain C Hydrogen bonds: C:A.18, C:V.41, C:G.74, C:T.75, C:G.76, C:G.76, C:K.77, C:T.78, C:T.78, C:A.79, C:D.303, C:Y.367, C:R.379, C:R.379 Salt bridges: C:H.19, C:K.77, C:R.405, C:R.405, C:R.405 ATP.3: 21 residues within 4Å: Chain E: A.18, H.19, I.22, G.39, F.40, V.41, G.72, P.73, G.74, T.75, G.76, K.77, T.78, A.79, D.303, Y.367, I.375, R.379, L.404, R.405, L.408 19 PLIP interactions: 19 interactions with chain E Hydrogen bonds: E:A.18, E:V.41, E:G.74, E:T.75, E:G.76, E:G.76, E:K.77, E:T.78, E:T.78, E:A.79, E:D.303, E:Y.367, E:R.379, E:R.379 Salt bridges: E:H.19, E:K.77, E:R.405, E:R.405, E:R.405

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lakomek, K. et al., Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2. Structure (2015)

Release Date

2015-02-18

Peptides

RuvB-like 1: ACE
RuvB-like 2: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

RuvB-like 1

RuvB-like 2

Related Entries With Identical Sequence