SMTL ID : 4xao.1

Crystal structure of the hPXR-LBD obtained in presence of the pesticide trans-nonachlor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

homo-dimer

Ligands

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 1 residues within 4Å: Chain A: L.310 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.310 IPA.3: 1 residues within 4Å: Chain B: L.310 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:L.310

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 4 residues within 4Å: Chain A: T.172, L.217, E.219, Y.222 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.222 Water bridges: A:T.172, A:K.213 MPD.4: 4 residues within 4Å: Chain B: T.172, L.217, E.219, Y.222 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.222 Water bridges: B:T.172, B:K.213

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Synergistic activation of human pregnane X receptor by binary cocktails of pharmaceutical and environmental compounds. Nat Commun (2015)

Release Date

2015-09-09

Peptides

Nuclear receptor subfamily 1 group I member 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Nuclear receptor subfamily 1 group I member 2

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