SMTL ID : 4xic.2 (1 other biounit)

ANTPHD WITH 15BP di-thioate modified DNA DUPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

monomer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 4 residues within 4Å: Chain A: Y.26 Chain B: G.6, C.7 Ligands: MPD.4 No protein-ligand interaction detected (PLIP) MPD.4: 3 residues within 4Å: Chain A: Y.26 Chain C: C.15 Ligands: MPD.1 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.26

2 x NI: NICKEL (II) ION(Non-covalent)(Non-functional Binders)

NI.2: 1 residues within 4Å: Chain A: H.22 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.22 NI.3: 1 residues within 4Å: Chain B: G.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zandarashvili, L. et al., Entropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate. Biophys.J. (2015)

Release Date

2015-11-25

Peptides

Homeotic protein antennapedia: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Homeotic protein antennapedia

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