SMTL ID : 5jlw.1 (1 other biounit)

AntpHD with 15bp DNA duplex R-monothioated at Cytidine-8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

4 x NI: NICKEL (II) ION(Non-covalent)(Non-functional Binders)

NI.1: 1 residues within 4Å: Chain A: H.22 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.22, H2O.1 NI.2: 1 residues within 4Å: Chain B: G.2 No protein-ligand interaction detected (PLIP) NI.3: 2 residues within 4Å: Chain B: A.12, G.13 No protein-ligand interaction detected (PLIP) NI.4: 5 residues within 4Å: Chain B: A.3, A.4, A.5 Chain C: T.14, C.15 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, D. et al., Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity. Chembiochem (2016)

Release Date

2016-06-22

Peptides

Homeotic protein antennapedia: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Homeotic protein antennapedia

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