SMTL ID : 4xnc.1

Crystal structure at room temperature of cyclophilin D in complex with an inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x EA4: ethyl N-[(4-aminobenzyl)carbamoyl]glycinate(Non-covalent)

EA4.1: 13 residues within 4Å: Chain A: R.54, F.59, M.60, Q.62, G.71, R.81, A.100, N.101, T.106, G.108, Q.110, F.112, H.125 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.59, A:F.112 Hydrogen bonds: A:Q.62, A:R.81, A:N.101, A:N.101, A:N.101 Water bridges: A:Q.110 Salt bridges: A:R.54, A:H.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gelin, M. et al., Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-08-12

Peptides

Peptidyl-prolyl cis-trans isomerase F, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase F, mitochondrial

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