SMTL ID : 4xss.1 (1 other biounit)

Insulin-like growth factor I in complex with site 1 of a hybrid insulin receptor / Type 1 insulin-like growth factor receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA- FUC: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-FUC.1: 4 residues within 4Å: Chain B: E.6, E.22, E.24, N.25 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 4 residues within 4Å: Chain B: D.234, R.252, N.255, D.261 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: R.135, T.172, V.173 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.173 Salt bridges: B:R.135

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain B: N.16, T.18 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:T.18 Hydrogen bonds: B:N.16 NAG.5: 10 residues within 4Å: Chain B: N.111, T.113, S.134, R.135, I.136, L.137, D.138, S.198, L.213, R.229 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.111, B:D.138, B:D.138, B:D.138, B:R.229 NAG.6: 5 residues within 4Å: Chain B: N.108, K.190, A.203, N.215, V.226 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:K.190, B:A.203 Hydrogen bonds: B:N.215 NAG.7: 2 residues within 4Å: Chain B: N.295, S.297 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Menting, J.G. et al., Structural Congruency of Ligand Binding to the Insulin and Insulin/Type 1 Insulin-like Growth Factor Hybrid Receptors. Structure (2015)

Release Date

2015-06-10

Peptides

Insulin-like growth factor I: A
Insulin receptor: B
Insulin-like growth factor receptor alpha-CT peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
E

C
F

Insulin-like growth factor I

Insulin receptor

Insulin-like growth factor receptor alpha-CT peptide

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