SMTL ID : 4xzl.1

Crystal structure of human AKR1B10 complexed with NADP+ and JF0049

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 31 residues within 4Å: Chain A: G.19, T.20, W.21, D.44, Y.49, K.78, H.111, W.112, S.160, N.161, Q.184, Y.210, S.211, P.212, L.213, G.214, S.215, P.216, D.217, L.229, A.246, I.261, P.262, K.263, S.264, V.265, T.266, R.269, E.272, N.273 Ligands: F49.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:W.21 Hydrogen bonds: A:T.20, A:W.21, A:D.44, A:S.160, A:N.161, A:Q.184, A:S.211, A:L.213, A:G.214, A:S.215, A:S.215, A:S.264, A:V.265, A:T.266, A:E.272, A:N.273 Water bridges: A:D.217, A:R.269, A:R.269 Salt bridges: A:R.269 pi-Stacking: A:Y.210 pi-Cation interactions: A:R.269

1 x F49: [2,4-dioxo-3-(2,3,4,5-tetrabromo-6-methoxybenzyl)-3,4-dihydropyrimidin-1(2H)-yl]acetic acid(Non-covalent)

F49.2: 12 residues within 4Å: Chain A: W.21, Y.49, W.80, H.111, W.112, F.116, F.123, R.125, W.220, L.301, Q.303 Ligands: NAP.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.301 Hydrogen bonds: A:Y.49, A:Y.49, A:Q.303 Salt bridges: A:H.111 pi-Stacking: A:F.123

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: H.201, T.206, N.257 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruiz, F.X. et al., Structural Determinants of the Selectivity of 3-Benzyluracil-1-acetic Acids toward Human Enzymes Aldose Reductase and AKR1B10. Chemmedchem (2015)

Release Date

2015-11-18

Peptides

Aldo-keto reductase family 1 member B10: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Aldo-keto reductase family 1 member B10

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