SMTL ID : 4zz3.1

Human GAR transformylase in complex with GAR and pemetrexed

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 4DW: N-{4-[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}-L-glutamic acid(Non-covalent)

4DW.1: 14 residues within 4Å: Chain A: L.86, F.89, M.90, R.91, I.92, L.93, V.98, N.107, V.140, A.141, E.142, V.144, D.145 Ligands: GAR.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.86, A:I.92, A:V.144 Hydrogen bonds: A:M.90, A:R.91, A:I.92, A:L.93, A:L.93, A:L.93, A:D.145 Salt bridges: A:R.91

1 x GAR: GLYCINAMIDE RIBONUCLEOTIDE(Non-covalent)

GAR.2: 11 residues within 4Å: Chain A: T.11, G.12, S.13, N.14, G.88, M.90, I.108, P.110, K.171, E.174 Ligands: 4DW.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.12, A:S.13, A:S.13, A:N.14, A:N.14, A:I.108, A:E.174, A:E.174 Salt bridges: A:K.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, L. et al., 6-Substituted Pyrrolo[2,3-d]pyrimidine Thienoyl Regioisomers as Targeted Antifolates for Folate Receptor alpha and the Proton-Coupled Folate Transporter in Human Tumors. J.Med.Chem. (2015)

Release Date

2015-12-16

Peptides

Trifunctional purine biosynthetic protein adenosine-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Trifunctional purine biosynthetic protein adenosine-3

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