SMTL ID : 5a5k.3 (3 other biounits)

AtGSTF2 from Arabidopsis thaliana in complex with camalexin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.77 Å

Oligo State

homo-hexamer

Ligands

6 x 7WB: (2Z)-2-indol-3-ylidene-3H-1,3-thiazole(Non-covalent)

7WB.1: 8 residues within 4Å: Chain A: I.99, I.102, G.103, V.106, V.150, Y.151, R.154 Chain B: F.66 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.106, A:Y.151, A:R.154, A:R.154 pi-Cation interactions: A:R.154 7WB.2: 7 residues within 4Å: Chain A: F.66 Chain B: I.99, I.102, V.150, Y.151, R.154, L.161 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.151, B:L.161 pi-Cation interactions: B:R.154 pi-Stacking: A:F.66 7WB.3: 7 residues within 4Å: Chain C: I.99, I.102, G.103, V.150, Y.151, R.154 Chain D: F.66 8 PLIP interactions: 1 interactions with chain D, 7 interactions with chain C pi-Stacking: D:F.66 Hydrophobic interactions: C:V.150, C:Y.151, C:R.154, C:R.154 Water bridges: C:I.99, C:M.100 pi-Cation interactions: C:R.154 7WB.4: 5 residues within 4Å: Chain C: F.66 Chain D: I.99, I.102, G.103, R.154 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:I.99 pi-Cation interactions: D:R.154 7WB.5: 7 residues within 4Å: Chain E: I.99, I.102, V.106, V.150, Y.151, R.154 Chain F: F.66 8 PLIP interactions: 7 interactions with chain E, 1 interactions with chain F Hydrophobic interactions: E:V.106, E:V.150, E:Y.151, E:Y.151, E:R.154, E:R.154 pi-Cation interactions: E:R.154 pi-Stacking: F:F.66 7WB.6: 8 residues within 4Å: Chain E: F.66 Chain F: I.99, I.102, G.103, V.150, Y.151, R.154, L.161 5 PLIP interactions: 5 interactions with chain F Hydrophobic interactions: F:R.154, F:R.154, F:L.161 pi-Stacking: F:Y.151 pi-Cation interactions: F:R.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmad, L. et al., Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands. FEBS Open Bio (2017)

Release Date

2016-06-29

Peptides

GLUTATHIONE S-TRANSFERASE F2: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
O

C
U

D
V

E
W

F
X

GLUTATHIONE S-TRANSFERASE F2

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