5b2j.1 | SWISS-MODEL Template Library

SMTL ID : 5b2j.1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-2-2-mer

Ligands

7 x MN: MANGANESE (II) ION(Non-covalent)(Non-functional Binders)

MN.1:	2 residues within 4Å: Chain E: Q.80, D.81 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:D.81, E:D.81
MN.2:	1 residues within 4Å: Chain I: T.86 No protein-ligand interaction detected (PLIP)
MN.3:	1 residues within 4Å: Chain I: G.121 No protein-ligand interaction detected (PLIP)
MN.4:	1 residues within 4Å: Chain I: G.100 No protein-ligand interaction detected (PLIP)
MN.5:	1 residues within 4Å: Chain J: G.100 No protein-ligand interaction detected (PLIP)
MN.6:	2 residues within 4Å: Chain J: G.71, A.72 No protein-ligand interaction detected (PLIP)
MN.7:	2 residues within 4Å: Chain J: G.121, G.122 No protein-ligand interaction detected (PLIP)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fujii, Y. et al., Crystal structure of human nucleosome core particle containing enzymatically introduced CpG methylation. Febs Open Bio (2016)

Release Date

2016-06-15

Peptides

Histone H3.1: AE
Histone H4: BF
Histone H2A type 1-B/E: CG
Histone H2B type 1-J: DH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

B
B

F
F

C
C

G
G

D
D

H
H