SMTL ID : 6a5u.1

RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt conformation

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-2-2-2-2-mer
Ligands
8 x ZN: ZINC ION(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kujirai, T. et al., Structural basis of the nucleosome transition during RNA polymerase II passage. Science (2018)
Release Date
2018-10-03
Peptides
DNA-directed RNA polymerase subunit: A
DNA-directed RNA polymerase subunit beta: B
RNA polymerase II third largest subunit B44, part of central core: C
RNA polymerase II subunit B32: D
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III: E
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III: F
RNA polymerase II subunit: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3: H
DNA-directed RNA polymerase subunit: I
RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III: J
RNA polymerase II subunit B12.5: K
RNA polymerase subunit ABC10-alpha: L
Histone H3.3: PT
Histone H4: QU
Histone H2A, Histone H2A type 1-B/E: RV
Histone H2B, Histone H2B type 1-J: SW
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
P
a
T
e
Q
b
U
f
R
c
V
g
S
d
W
h

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerase subunit beta

RNA polymerase II third largest subunit B44, part of central core

RNA polymerase II subunit B32

RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III

RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III

RNA polymerase II subunit

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase subunit

RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III

RNA polymerase II subunit B12.5

RNA polymerase subunit ABC10-alpha

Histone H3.3

Histone H4

Histone H2A, Histone H2A type 1-B/E

Histone H2B, Histone H2B type 1-J

Related Entries With Identical Sequence

3a6n.1 | 3afa.1 | 3an2.1 | 3av1.1 | 3av2.1 | 3ayw.1 | 3aze.1 | 3azf.1 | 3azg.1 | 3azh.1 | 3azi.1 | 3azj.1 | 3azk.1 | 3azl.1 | 3azm.1 | 3azn.1 | 3w96.1 | 3w97.1 | 3w98.1 | 3w99.1 | 3wa9.1 | 3waa.1 | 3wkj.1 | 3wtp.1 | 4ym5.1 | 4ym6.1 | 4z5t.1 | 5av5.1 | 5av6.1 | 5av8.1  more...