SMTL ID : 6j50.1

RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-2-2-2-mer
Ligands
9 x ZN: ZINC ION(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Ehara, H. et al., Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science (2019)
Release Date
2019-02-20
Peptides
DNA-directed RNA polymerase subunit: A
DNA-directed RNA polymerase subunit beta: B
RNA polymerase II third largest subunit B44, part of central core: C
RNA polymerase II subunit B32: D
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III: E
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III: F
RNA polymerase II subunit: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3: H
DNA-directed RNA polymerase subunit: I
RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III: J
RNA polymerase II subunit B12.5: K
RNA polymerase subunit ABC10-alpha: L
Transcription elongation factor SPT4: P
Protein that forms a complex with Spt4p: Q
Histone H3.3: RV
Histone H4: SW
Histone H2A type 1-B/E: TX
Histone H2B type 1-J: UY
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
P
V
Q
W
R
a
V
e
S
b
W
f
T
c
X
g
U
d
Y
h

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerase subunit beta

RNA polymerase II third largest subunit B44, part of central core

RNA polymerase II subunit B32

RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III

RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III

RNA polymerase II subunit

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase subunit

RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III

RNA polymerase II subunit B12.5

RNA polymerase subunit ABC10-alpha

Transcription elongation factor SPT4

Protein that forms a complex with Spt4p

Histone H3.3

Histone H4

Histone H2A type 1-B/E

Histone H2B type 1-J

Related Entries With Identical Sequence

3a6n.1 | 3afa.1 | 3an2.1 | 3av1.1 | 3av2.1 | 3ayw.1 | 3aze.1 | 3azf.1 | 3azg.1 | 3azh.1 | 3azi.1 | 3azj.1 | 3azk.1 | 3azl.1 | 3azm.1 | 3azn.1 | 3w96.1 | 3w97.1 | 3w98.1 | 3w99.1 | 3wa9.1 | 3waa.1 | 3wkj.1 | 3wtp.1 | 4ym5.1 | 4ym6.1 | 4z5t.1 | 5av5.1 | 5av6.1 | 5av8.1  more...