SMTL ID : 5bvk.1

Fragment-based discovery of potent and selective DDR1/2 inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

6 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 2 residues within 4Å: Chain A: F.256, Q.258 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: L.294, R.297 Ligand excluded by PLIP IOD.3: 6 residues within 4Å: Chain A: G.30, Q.31, F.32, G.33, K.66, G.197 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: H.313 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain A: P.70 Ligand excluded by PLIP IOD.6: 4 residues within 4Å: Chain A: K.66, G.197, M.198 Ligands: 4VC.7 Ligand excluded by PLIP

1 x 4VC: 1-(2-chlorophenyl)-3-(pyridin-3-ylmethyl)urea(Non-covalent)

4VC.7: 15 residues within 4Å: Chain A: V.35, A.64, K.66, E.83, I.86, M.87, L.90, I.96, M.110, T.112, F.173, A.194, D.195, F.196 Ligands: IOD.6 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:K.66, A:K.66, A:I.86, A:L.90, A:I.96, A:I.96, A:M.110, A:F.173, A:F.173, A:D.195 Hydrogen bonds: A:E.83, A:E.83, A:D.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, C.W. et al., Fragment-Based Discovery of Potent and Selective DDR1/2 Inhibitors. Acs Med.Chem.Lett. (2015)

Release Date

2015-08-05

Peptides

Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epithelial discoidin domain-containing receptor 1

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