SMTL ID : 5bvw.1

Fragment-based discovery of potent and selective DDR1/2 inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

8 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 2 residues within 4Å: Chain A: F.256, Q.258 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: L.294, R.297, P.307 Ligand excluded by PLIP IOD.3: 6 residues within 4Å: Chain A: G.30, Q.31, F.32, G.33, K.66 Ligands: IOD.8 Ligand excluded by PLIP IOD.4: 3 residues within 4Å: Chain A: D.92, P.93, R.97 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain A: H.313 Ligand excluded by PLIP IOD.6: 1 residues within 4Å: Chain A: P.70 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: Q.128, L.129 Ligand excluded by PLIP IOD.8: 6 residues within 4Å: Chain A: E.29, G.30, G.33, V.35, K.66 Ligands: IOD.3 Ligand excluded by PLIP

1 x 1N1: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE(Non-covalent)

1N1.9: 18 residues within 4Å: Chain A: L.27, V.35, A.64, V.65, K.66, E.83, M.87, I.96, M.110, T.112, D.113, Y.114, M.115, E.116, G.118, L.184, A.194, F.196 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.64, A:K.66, A:T.112, A:Y.114 Hydrogen bonds: A:T.112, A:M.115, A:M.115 Water bridges: A:D.119, A:D.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, C.W. et al., Fragment-Based Discovery of Potent and Selective DDR1/2 Inhibitors. Acs Med.Chem.Lett. (2015)

Release Date

2015-08-05

Peptides

Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epithelial discoidin domain-containing receptor 1

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