SMTL ID : 5c11.1

Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.3, C.8, P.11, H.30, C.33 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.3, A:C.8, A:H.30, A:C.33 ZN.2: 4 residues within 4Å: Chain A: C.21, C.25, C.48, C.51 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.25, A:C.48, A:C.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, J. et al., Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide. Nat Commun (2015)

Release Date

2015-11-25

Peptides

Lysine-specific demethylase 5A: A
H3 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lysine-specific demethylase 5A

H3 peptide

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