SMTL ID : 5cte.1

Humanized yeast ACC carboxyltransferase domain bound to 2,2-dimethylpropyl (1S)-1-methyl-8-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,8-diazaspiro[4.5]decane-2-carboxylate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

homo-dimer

Ligands

2 x 57L: 2,2-dimethylpropyl (1S)-1-methyl-8-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,8-diazaspiro[4.5]decane-2-carboxylate(Non-covalent)

57L.1: 22 residues within 4Å: Chain A: V.451, F.453, R.482, G.483, F.484, S.485, G.486, G.487, D.490, R.524, L.553, E.554, E.556, G.557, E.560, I.561 Chain B: T.285, A.289, L.290, K.292, V.293, L.294 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:T.285, B:A.289, B:V.293, B:L.294, A:L.553, A:I.561 Hydrogen bonds: A:G.486, A:E.554, A:E.560 57L.2: 22 residues within 4Å: Chain A: T.285, A.289, L.290, K.292, V.293, L.294 Chain B: V.451, F.453, R.482, G.483, F.484, S.485, G.486, G.487, D.490, R.524, L.553, E.554, E.556, G.557, E.560, I.561 9 PLIP interactions: 3 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:T.285, A:A.289, A:L.294, B:I.561 Hydrogen bonds: B:G.486, B:E.554, B:E.560, B:E.560 Water bridges: B:G.525

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: R.682, W.686, K.713 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.682, B:K.713

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kung, D.W. et al., Discovery of spirocyclic-diamine inhibitors of mammalian acetyl CoA-carboxylase. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-10-14

Peptides

Acetyl-CoA carboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Acetyl-CoA carboxylase

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