SMTL ID : 5dtf.1 (1 other biounit)

context-independent anti-hypusine antibody FabHpu98.61 in complex with hypusine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GLY- 5CT- GLY- ALA: Peptide: GLY-5CT-GLY-ALA(Non-covalent)

GLY-5CT-GLY-ALA.1: 13 residues within 4Å: Chain A: T.40, N.42, D.57, Y.59, D.103, W.105, A.107 Chain B: K.30, Y.32, G.91, Y.92, T.93, S.94 11 PLIP interactions: 7 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:W.105, B:Y.32 Hydrogen bonds: A:N.42, A:D.57, A:D.57, A:Y.59, A:A.107, B:Y.32, B:G.91 Water bridges: A:Y.59, B:Y.92

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: G.49, K.50, G.51 Chain B: T.85, Y.87, G.103 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.87, B:G.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhai, Q. et al., Structural Analysis and Optimization of Context-Independent Anti-Hypusine Antibodies. J.Mol.Biol. (2016)

Release Date

2016-02-17

Peptides

Fab Hpu98.61 Heavy Chain: A
Fab Hpu98.61 Light Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

Fab Hpu98.61 Heavy Chain

Fab Hpu98.61 Light Chain

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