- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 1 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
MGD.3: 38 residues within 4Å:- Chain A: N.35, K.76, D.170, W.200, G.201, S.202, N.203, Q.206, T.207, R.208, I.228, S.229, P.230, D.231, N.233, P.247, G.248, D.250, G.421, G.422, G.423, W.427, Y.457, I.458, G.459, N.761, P.763, H.764, S.765, R.766, S.768, V.769, H.770, R.830, H.835, R.882
- Ligands: MO.2, MD1.4
29 PLIP interactions:29 interactions with chain A- Hydrogen bonds: A:K.76, A:G.201, A:N.203, A:T.207, A:T.207, A:R.208, A:R.208, A:I.228, A:S.229, A:N.233, A:G.248, A:G.422, A:G.423, A:Y.457, A:N.761, A:H.764, A:H.764, A:R.766, A:S.768, A:H.770, A:H.770, A:R.830, A:R.830, A:R.882
- Water bridges: A:D.231, A:S.765
- Salt bridges: A:D.250, A:H.764, A:R.882
- 1 x MD1: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER(Non-covalent)
MD1.4: 35 residues within 4Å:- Chain A: L.33, N.35, P.138, Y.168, D.170, H.426, Y.536, R.537, G.538, N.539, Q.543, K.545, I.564, N.565, I.566, R.567, D.569, S.581, W.584, K.587, D.615, S.762, H.764, V.769, H.770, S.771, T.772, H.835, C.836, Q.849, C.852, Q.881, R.882
- Ligands: MO.2, MGD.3
30 PLIP interactions:30 interactions with chain A- Hydrogen bonds: A:H.426, A:R.537, A:N.539, A:Q.543, A:K.545, A:I.564, A:N.565, A:R.567, A:D.569, A:D.569, A:S.581, A:K.587, A:K.587, A:S.762, A:S.762, A:S.762, A:H.764, A:V.769, A:S.771, A:T.772, A:T.772, A:Q.849, A:R.882
- Water bridges: A:Y.168, A:Y.168, A:R.537, A:G.538, A:G.538
- Salt bridges: A:D.615, A:H.770
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 7 residues within 4Å:- Chain A: W.242, H.244, G.397, V.398, T.399
- Chain B: E.268, G.272
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.397, A:T.399
EDO.6: 8 residues within 4Å:- Chain A: Y.510, D.513, S.514, Q.519, T.736, P.858, L.861, V.862
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Y.510, A:S.514, A:T.736
- Water bridges: A:H.734
EDO.7: 6 residues within 4Å:- Chain A: D.803, N.804, D.805, P.896, S.898
- Chain B: P.110
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.804, A:D.805
- Water bridges: A:S.898
EDO.12: 6 residues within 4Å:- Chain A: F.9, Y.11, E.15
- Chain B: Y.155, R.157, Q.159
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:E.15, B:K.156, B:Q.159
- Water bridges: B:E.158
- 1 x F3S: FE3-S4 CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Youngblut, M.D. et al., Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues. J.Biol.Chem. (2016)
- Release Date
- 2016-03-09
- Peptides
- DMSO reductase family type II enzyme, molybdopterin subunit: A
DMSO reductase family type II enzyme, iron-sulfur subunit: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 1 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 1 x MD1: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER(Non-covalent)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x F3S: FE3-S4 CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Youngblut, M.D. et al., Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues. J.Biol.Chem. (2016)
- Release Date
- 2016-03-09
- Peptides
- DMSO reductase family type II enzyme, molybdopterin subunit: A
DMSO reductase family type II enzyme, iron-sulfur subunit: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D