- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.10 Å
- Oligo State
- homo-24-mer
- Ligands
- 48 x MN: MANGANESE (II) ION(Non-covalent)
- 24 x 5DL: [(2S)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]phosphonic acid(Non-covalent)
5DL.3: 17 residues within 4Å:- Chain A: R.97, R.119, S.197, S.198, K.199
- Chain K: H.45, L.105, H.167, H.168, E.171, K.175
- Chain M: E.19, H.71, H.72, E.75
- Ligands: MN.1, MN.2
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain K- Hydrogen bonds: A:R.97, A:R.97, A:R.119, A:R.119, A:S.197, A:S.198, K:K.175
- Water bridges: A:S.197, A:S.198
5DL.14: 17 residues within 4Å:- Chain B: R.97, R.119, S.197, S.198, K.199
- Chain J: H.45, L.105, H.167, H.168, E.171, K.175
- Chain N: E.19, H.71, H.72, E.75
- Ligands: MN.12, MN.13
9 PLIP interactions:1 interactions with chain J, 8 interactions with chain B- Hydrogen bonds: J:K.175, B:R.97, B:R.97, B:R.119, B:R.119, B:S.197, B:S.198
- Water bridges: B:S.197, B:S.198
5DL.25: 17 residues within 4Å:- Chain C: R.97, R.119, S.197, S.198, K.199
- Chain L: H.45, L.105, H.167, H.168, E.171, K.175
- Chain P: E.19, H.71, H.72, E.75
- Ligands: MN.23, MN.24
9 PLIP interactions:8 interactions with chain C, 1 interactions with chain L- Hydrogen bonds: C:R.97, C:R.97, C:R.119, C:R.119, C:S.197, C:S.198, L:K.175
- Water bridges: C:S.197, C:S.198
5DL.36: 17 residues within 4Å:- Chain D: R.97, R.119, S.197, S.198, K.199
- Chain I: H.45, L.105, H.167, H.168, E.171, K.175
- Chain O: E.19, H.71, H.72, E.75
- Ligands: MN.34, MN.35
9 PLIP interactions:8 interactions with chain D, 1 interactions with chain I- Hydrogen bonds: D:R.97, D:R.97, D:R.119, D:R.119, D:S.197, D:S.198, I:K.175
- Water bridges: D:S.197, D:S.198
5DL.47: 17 residues within 4Å:- Chain C: H.45, L.105, H.167, H.168, E.171, K.175
- Chain E: R.97, R.119, S.197, S.198, K.199
- Chain W: E.19, H.71, H.72, E.75
- Ligands: MN.45, MN.46
9 PLIP interactions:1 interactions with chain C, 8 interactions with chain E- Hydrogen bonds: C:K.175, E:R.97, E:R.97, E:R.119, E:R.119, E:S.197, E:S.198
- Water bridges: E:S.197, E:S.198
5DL.58: 17 residues within 4Å:- Chain B: H.45, L.105, H.167, H.168, E.171, K.175
- Chain F: R.97, R.119, S.197, S.198, K.199
- Chain X: E.19, H.71, H.72, E.75
- Ligands: MN.56, MN.57
9 PLIP interactions:8 interactions with chain F, 1 interactions with chain B- Hydrogen bonds: F:R.97, F:R.97, F:R.119, F:R.119, F:S.197, F:S.198, B:K.175
- Water bridges: F:S.197, F:S.198
5DL.69: 17 residues within 4Å:- Chain D: H.45, L.105, H.167, H.168, E.171, K.175
- Chain G: R.97, R.119, S.197, S.198, K.199
- Chain V: E.19, H.71, H.72, E.75
- Ligands: MN.67, MN.68
9 PLIP interactions:8 interactions with chain G, 1 interactions with chain D- Hydrogen bonds: G:R.97, G:R.97, G:R.119, G:R.119, G:S.197, G:S.198, D:K.175
- Water bridges: G:S.197, G:S.198
5DL.80: 17 residues within 4Å:- Chain A: H.45, L.105, H.167, H.168, E.171, K.175
- Chain H: R.97, R.119, S.197, S.198, K.199
- Chain U: E.19, H.71, H.72, E.75
- Ligands: MN.78, MN.79
9 PLIP interactions:8 interactions with chain H, 1 interactions with chain A- Hydrogen bonds: H:R.97, H:R.97, H:R.119, H:R.119, H:S.197, H:S.198, A:K.175
- Water bridges: H:S.197, H:S.198
5DL.91: 17 residues within 4Å:- Chain G: H.45, L.105, H.167, H.168, E.171, K.175
- Chain I: R.97, R.119, S.197, S.198, K.199
- Chain T: E.19, H.71, H.72, E.75
- Ligands: MN.89, MN.90
9 PLIP interactions:8 interactions with chain I, 1 interactions with chain G- Hydrogen bonds: I:R.97, I:R.97, I:R.119, I:R.119, I:S.197, I:S.198, G:K.175
- Water bridges: I:S.197, I:S.198
5DL.102: 17 residues within 4Å:- Chain F: H.45, L.105, H.167, H.168, E.171, K.175
- Chain J: R.97, R.119, S.197, S.198, K.199
- Chain S: E.19, H.71, H.72, E.75
- Ligands: MN.100, MN.101
9 PLIP interactions:8 interactions with chain J, 1 interactions with chain F- Hydrogen bonds: J:R.97, J:R.97, J:R.119, J:R.119, J:S.197, J:S.198, F:K.175
- Water bridges: J:S.197, J:S.198
5DL.113: 17 residues within 4Å:- Chain H: H.45, L.105, H.167, H.168, E.171, K.175
- Chain K: R.97, R.119, S.197, S.198, K.199
- Chain Q: E.19, H.71, H.72, E.75
- Ligands: MN.111, MN.112
9 PLIP interactions:8 interactions with chain K, 1 interactions with chain H- Hydrogen bonds: K:R.97, K:R.97, K:R.119, K:R.119, K:S.197, K:S.198, H:K.175
- Water bridges: K:S.197, K:S.198
5DL.124: 17 residues within 4Å:- Chain E: H.45, L.105, H.167, H.168, E.171, K.175
- Chain L: R.97, R.119, S.197, S.198, K.199
- Chain R: E.19, H.71, H.72, E.75
- Ligands: MN.122, MN.123
9 PLIP interactions:8 interactions with chain L, 1 interactions with chain E- Hydrogen bonds: L:R.97, L:R.97, L:R.119, L:R.119, L:S.197, L:S.198, E:K.175
- Water bridges: L:S.197, L:S.198
5DL.135: 17 residues within 4Å:- Chain A: E.19, H.71, H.72, E.75
- Chain M: R.97, R.119, S.197, S.198, K.199
- Chain W: H.45, L.105, H.167, H.168, E.171, K.175
- Ligands: MN.133, MN.134
9 PLIP interactions:8 interactions with chain M, 1 interactions with chain W- Hydrogen bonds: M:R.97, M:R.97, M:R.119, M:R.119, M:S.197, M:S.198, W:K.175
- Water bridges: M:S.197, M:S.198
5DL.146: 17 residues within 4Å:- Chain B: E.19, H.71, H.72, E.75
- Chain N: R.97, R.119, S.197, S.198, K.199
- Chain V: H.45, L.105, H.167, H.168, E.171, K.175
- Ligands: MN.144, MN.145
9 PLIP interactions:8 interactions with chain N, 1 interactions with chain V- Hydrogen bonds: N:R.97, N:R.97, N:R.119, N:R.119, N:S.197, N:S.198, V:K.175
- Water bridges: N:S.197, N:S.198
5DL.157: 17 residues within 4Å:- Chain D: E.19, H.71, H.72, E.75
- Chain O: R.97, R.119, S.197, S.198, K.199
- Chain X: H.45, L.105, H.167, H.168, E.171, K.175
- Ligands: MN.155, MN.156
9 PLIP interactions:8 interactions with chain O, 1 interactions with chain X- Hydrogen bonds: O:R.97, O:R.97, O:R.119, O:R.119, O:S.197, O:S.198, X:K.175
- Water bridges: O:S.197, O:S.198
5DL.168: 17 residues within 4Å:- Chain C: E.19, H.71, H.72, E.75
- Chain P: R.97, R.119, S.197, S.198, K.199
- Chain U: H.45, L.105, H.167, H.168, E.171, K.175
- Ligands: MN.166, MN.167
9 PLIP interactions:1 interactions with chain U, 8 interactions with chain P- Hydrogen bonds: U:K.175, P:R.97, P:R.97, P:R.119, P:R.119, P:S.197, P:S.198
- Water bridges: P:S.197, P:S.198
5DL.179: 17 residues within 4Å:- Chain K: E.19, H.71, H.72, E.75
- Chain O: H.45, L.105, H.167, H.168, E.171, K.175
- Chain Q: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.177, MN.178
9 PLIP interactions:8 interactions with chain Q, 1 interactions with chain O- Hydrogen bonds: Q:R.97, Q:R.97, Q:R.119, Q:R.119, Q:S.197, Q:S.198, O:K.175
- Water bridges: Q:S.197, Q:S.198
5DL.190: 17 residues within 4Å:- Chain L: E.19, H.71, H.72, E.75
- Chain N: H.45, L.105, H.167, H.168, E.171, K.175
- Chain R: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.188, MN.189
9 PLIP interactions:8 interactions with chain R, 1 interactions with chain N- Hydrogen bonds: R:R.97, R:R.97, R:R.119, R:R.119, R:S.197, R:S.198, N:K.175
- Water bridges: R:S.197, R:S.198
5DL.201: 17 residues within 4Å:- Chain J: E.19, H.71, H.72, E.75
- Chain P: H.45, L.105, H.167, H.168, E.171, K.175
- Chain S: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.199, MN.200
9 PLIP interactions:1 interactions with chain P, 8 interactions with chain S- Hydrogen bonds: P:K.175, S:R.97, S:R.97, S:R.119, S:R.119, S:S.197, S:S.198
- Water bridges: S:S.197, S:S.198
5DL.212: 17 residues within 4Å:- Chain I: E.19, H.71, H.72, E.75
- Chain M: H.45, L.105, H.167, H.168, E.171, K.175
- Chain T: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.210, MN.211
9 PLIP interactions:1 interactions with chain M, 8 interactions with chain T- Hydrogen bonds: M:K.175, T:R.97, T:R.97, T:R.119, T:R.119, T:S.197, T:S.198
- Water bridges: T:S.197, T:S.198
5DL.223: 17 residues within 4Å:- Chain H: E.19, H.71, H.72, E.75
- Chain S: H.45, L.105, H.167, H.168, E.171, K.175
- Chain U: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.221, MN.222
9 PLIP interactions:8 interactions with chain U, 1 interactions with chain S- Hydrogen bonds: U:R.97, U:R.97, U:R.119, U:R.119, U:S.197, U:S.198, S:K.175
- Water bridges: U:S.197, U:S.198
5DL.234: 17 residues within 4Å:- Chain G: E.19, H.71, H.72, E.75
- Chain R: H.45, L.105, H.167, H.168, E.171, K.175
- Chain V: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.232, MN.233
9 PLIP interactions:8 interactions with chain V, 1 interactions with chain R- Hydrogen bonds: V:R.97, V:R.97, V:R.119, V:R.119, V:S.197, V:S.198, R:K.175
- Water bridges: V:S.197, V:S.198
5DL.245: 17 residues within 4Å:- Chain E: E.19, H.71, H.72, E.75
- Chain T: H.45, L.105, H.167, H.168, E.171, K.175
- Chain W: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.243, MN.244
9 PLIP interactions:8 interactions with chain W, 1 interactions with chain T- Hydrogen bonds: W:R.97, W:R.97, W:R.119, W:R.119, W:S.197, W:S.198, T:K.175
- Water bridges: W:S.197, W:S.198
5DL.256: 17 residues within 4Å:- Chain F: E.19, H.71, H.72, E.75
- Chain Q: H.45, L.105, H.167, H.168, E.171, K.175
- Chain X: R.97, R.119, S.197, S.198, K.199
- Ligands: MN.254, MN.255
9 PLIP interactions:8 interactions with chain X, 1 interactions with chain Q- Hydrogen bonds: X:R.97, X:R.97, X:R.119, X:R.119, X:S.197, X:S.198, Q:K.175
- Water bridges: X:S.197, X:S.198
- 24 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.4: 11 residues within 4Å:- Chain A: D.100, F.101, Q.183
- Chain H: D.100, F.101, Q.183
- Chain K: D.100, F.101, Q.183
- Ligands: TRS.81, TRS.114
Ligand excluded by PLIPTRS.15: 11 residues within 4Å:- Chain B: D.100, F.101, Q.183
- Chain F: D.100, F.101, Q.183
- Chain J: D.100, F.101, Q.183
- Ligands: TRS.59, TRS.103
Ligand excluded by PLIPTRS.26: 11 residues within 4Å:- Chain C: D.100, F.101, Q.183
- Chain E: D.100, F.101, Q.183
- Chain L: D.100, F.101, Q.183
- Ligands: TRS.48, TRS.125
Ligand excluded by PLIPTRS.37: 11 residues within 4Å:- Chain D: D.100, F.101, Q.183
- Chain G: D.100, F.101, Q.183
- Chain I: D.100, F.101, Q.183
- Ligands: TRS.70, TRS.92
Ligand excluded by PLIPTRS.48: 11 residues within 4Å:- Chain C: D.100, F.101, Q.183
- Chain E: D.100, F.101, Q.183
- Chain L: D.100, F.101, Q.183
- Ligands: TRS.26, TRS.125
Ligand excluded by PLIPTRS.59: 11 residues within 4Å:- Chain B: D.100, F.101, Q.183
- Chain F: D.100, F.101, Q.183
- Chain J: D.100, F.101, Q.183
- Ligands: TRS.15, TRS.103
Ligand excluded by PLIPTRS.70: 11 residues within 4Å:- Chain D: D.100, F.101, Q.183
- Chain G: D.100, F.101, Q.183
- Chain I: D.100, F.101, Q.183
- Ligands: TRS.37, TRS.92
Ligand excluded by PLIPTRS.81: 11 residues within 4Å:- Chain A: D.100, F.101, Q.183
- Chain H: D.100, F.101, Q.183
- Chain K: D.100, F.101, Q.183
- Ligands: TRS.4, TRS.114
Ligand excluded by PLIPTRS.92: 11 residues within 4Å:- Chain D: D.100, F.101, Q.183
- Chain G: D.100, F.101, Q.183
- Chain I: D.100, F.101, Q.183
- Ligands: TRS.37, TRS.70
Ligand excluded by PLIPTRS.103: 11 residues within 4Å:- Chain B: D.100, F.101, Q.183
- Chain F: D.100, F.101, Q.183
- Chain J: D.100, F.101, Q.183
- Ligands: TRS.15, TRS.59
Ligand excluded by PLIPTRS.114: 11 residues within 4Å:- Chain A: D.100, F.101, Q.183
- Chain H: D.100, F.101, Q.183
- Chain K: D.100, F.101, Q.183
- Ligands: TRS.4, TRS.81
Ligand excluded by PLIPTRS.125: 11 residues within 4Å:- Chain C: D.100, F.101, Q.183
- Chain E: D.100, F.101, Q.183
- Chain L: D.100, F.101, Q.183
- Ligands: TRS.26, TRS.48
Ligand excluded by PLIPTRS.136: 11 residues within 4Å:- Chain M: D.100, F.101, Q.183
- Chain T: D.100, F.101, Q.183
- Chain W: D.100, F.101, Q.183
- Ligands: TRS.213, TRS.246
Ligand excluded by PLIPTRS.147: 11 residues within 4Å:- Chain N: D.100, F.101, Q.183
- Chain R: D.100, F.101, Q.183
- Chain V: D.100, F.101, Q.183
- Ligands: TRS.191, TRS.235
Ligand excluded by PLIPTRS.158: 11 residues within 4Å:- Chain O: D.100, F.101, Q.183
- Chain Q: D.100, F.101, Q.183
- Chain X: D.100, F.101, Q.183
- Ligands: TRS.180, TRS.257
Ligand excluded by PLIPTRS.169: 11 residues within 4Å:- Chain P: D.100, F.101, Q.183
- Chain S: D.100, F.101, Q.183
- Chain U: D.100, F.101, Q.183
- Ligands: TRS.202, TRS.224
Ligand excluded by PLIPTRS.180: 11 residues within 4Å:- Chain O: D.100, F.101, Q.183
- Chain Q: D.100, F.101, Q.183
- Chain X: D.100, F.101, Q.183
- Ligands: TRS.158, TRS.257
Ligand excluded by PLIPTRS.191: 11 residues within 4Å:- Chain N: D.100, F.101, Q.183
- Chain R: D.100, F.101, Q.183
- Chain V: D.100, F.101, Q.183
- Ligands: TRS.147, TRS.235
Ligand excluded by PLIPTRS.202: 11 residues within 4Å:- Chain P: D.100, F.101, Q.183
- Chain S: D.100, F.101, Q.183
- Chain U: D.100, F.101, Q.183
- Ligands: TRS.169, TRS.224
Ligand excluded by PLIPTRS.213: 11 residues within 4Å:- Chain M: D.100, F.101, Q.183
- Chain T: D.100, F.101, Q.183
- Chain W: D.100, F.101, Q.183
- Ligands: TRS.136, TRS.246
Ligand excluded by PLIPTRS.224: 11 residues within 4Å:- Chain P: D.100, F.101, Q.183
- Chain S: D.100, F.101, Q.183
- Chain U: D.100, F.101, Q.183
- Ligands: TRS.169, TRS.202
Ligand excluded by PLIPTRS.235: 11 residues within 4Å:- Chain N: D.100, F.101, Q.183
- Chain R: D.100, F.101, Q.183
- Chain V: D.100, F.101, Q.183
- Ligands: TRS.147, TRS.191
Ligand excluded by PLIPTRS.246: 11 residues within 4Å:- Chain M: D.100, F.101, Q.183
- Chain T: D.100, F.101, Q.183
- Chain W: D.100, F.101, Q.183
- Ligands: TRS.136, TRS.213
Ligand excluded by PLIPTRS.257: 11 residues within 4Å:- Chain O: D.100, F.101, Q.183
- Chain Q: D.100, F.101, Q.183
- Chain X: D.100, F.101, Q.183
- Ligands: TRS.158, TRS.180
Ligand excluded by PLIP- 168 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 6 residues within 4Å:- Chain A: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.6: 4 residues within 4Å:- Chain A: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.7: 10 residues within 4Å:- Chain A: P.120, Y.121, Q.146, N.150
- Chain M: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.139
Ligand excluded by PLIPEDO.8: 6 residues within 4Å:- Chain A: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.9: 3 residues within 4Å:- Chain A: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.10: 5 residues within 4Å:- Chain A: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.11: 5 residues within 4Å:- Chain A: F.101, R.179
- Chain H: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.16: 6 residues within 4Å:- Chain B: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.17: 4 residues within 4Å:- Chain B: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.18: 10 residues within 4Å:- Chain B: P.120, Y.121, Q.146, N.150
- Chain N: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.150
Ligand excluded by PLIPEDO.19: 6 residues within 4Å:- Chain B: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.20: 3 residues within 4Å:- Chain B: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.21: 5 residues within 4Å:- Chain B: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.22: 5 residues within 4Å:- Chain B: F.101, R.179
- Chain F: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.27: 6 residues within 4Å:- Chain C: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.28: 4 residues within 4Å:- Chain C: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.29: 10 residues within 4Å:- Chain C: P.120, Y.121, Q.146, N.150
- Chain P: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.172
Ligand excluded by PLIPEDO.30: 6 residues within 4Å:- Chain C: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.31: 3 residues within 4Å:- Chain C: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.32: 5 residues within 4Å:- Chain C: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.33: 5 residues within 4Å:- Chain C: F.101, R.179
- Chain E: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.38: 6 residues within 4Å:- Chain D: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.39: 4 residues within 4Å:- Chain D: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.40: 10 residues within 4Å:- Chain D: P.120, Y.121, Q.146, N.150
- Chain O: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.161
Ligand excluded by PLIPEDO.41: 6 residues within 4Å:- Chain D: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.42: 3 residues within 4Å:- Chain D: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.43: 5 residues within 4Å:- Chain D: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.44: 5 residues within 4Å:- Chain D: F.101, R.179
- Chain G: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.49: 6 residues within 4Å:- Chain E: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.50: 4 residues within 4Å:- Chain E: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.51: 10 residues within 4Å:- Chain E: P.120, Y.121, Q.146, N.150
- Chain W: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.249
Ligand excluded by PLIPEDO.52: 6 residues within 4Å:- Chain E: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.53: 3 residues within 4Å:- Chain E: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.54: 5 residues within 4Å:- Chain E: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.55: 5 residues within 4Å:- Chain E: F.101, R.179
- Chain L: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.60: 6 residues within 4Å:- Chain F: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.61: 4 residues within 4Å:- Chain F: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.62: 10 residues within 4Å:- Chain F: P.120, Y.121, Q.146, N.150
- Chain X: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.260
Ligand excluded by PLIPEDO.63: 6 residues within 4Å:- Chain F: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.64: 3 residues within 4Å:- Chain F: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.65: 5 residues within 4Å:- Chain F: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.66: 5 residues within 4Å:- Chain F: F.101, R.179
- Chain J: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.71: 6 residues within 4Å:- Chain G: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.72: 4 residues within 4Å:- Chain G: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.73: 10 residues within 4Å:- Chain G: P.120, Y.121, Q.146, N.150
- Chain V: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.238
Ligand excluded by PLIPEDO.74: 6 residues within 4Å:- Chain G: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.75: 3 residues within 4Å:- Chain G: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.76: 5 residues within 4Å:- Chain G: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.77: 5 residues within 4Å:- Chain G: F.101, R.179
- Chain I: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.82: 6 residues within 4Å:- Chain H: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.83: 4 residues within 4Å:- Chain H: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.84: 10 residues within 4Å:- Chain H: P.120, Y.121, Q.146, N.150
- Chain U: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.227
Ligand excluded by PLIPEDO.85: 6 residues within 4Å:- Chain H: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.86: 3 residues within 4Å:- Chain H: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.87: 5 residues within 4Å:- Chain H: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.88: 5 residues within 4Å:- Chain H: F.101, R.179
- Chain K: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.93: 6 residues within 4Å:- Chain I: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.94: 4 residues within 4Å:- Chain I: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.95: 10 residues within 4Å:- Chain I: P.120, Y.121, Q.146, N.150
- Chain T: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.216
Ligand excluded by PLIPEDO.96: 6 residues within 4Å:- Chain I: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.97: 3 residues within 4Å:- Chain I: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.98: 5 residues within 4Å:- Chain I: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.99: 5 residues within 4Å:- Chain D: N.96, F.98, Q.183
- Chain I: F.101, R.179
Ligand excluded by PLIPEDO.104: 6 residues within 4Å:- Chain J: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.105: 4 residues within 4Å:- Chain J: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.106: 10 residues within 4Å:- Chain J: P.120, Y.121, Q.146, N.150
- Chain S: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.205
Ligand excluded by PLIPEDO.107: 6 residues within 4Å:- Chain J: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.108: 3 residues within 4Å:- Chain J: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.109: 5 residues within 4Å:- Chain J: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.110: 5 residues within 4Å:- Chain B: N.96, F.98, Q.183
- Chain J: F.101, R.179
Ligand excluded by PLIPEDO.115: 6 residues within 4Å:- Chain K: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.116: 4 residues within 4Å:- Chain K: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.117: 10 residues within 4Å:- Chain K: P.120, Y.121, Q.146, N.150
- Chain Q: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.183
Ligand excluded by PLIPEDO.118: 6 residues within 4Å:- Chain K: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.119: 3 residues within 4Å:- Chain K: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.120: 5 residues within 4Å:- Chain K: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.121: 5 residues within 4Å:- Chain A: N.96, F.98, Q.183
- Chain K: F.101, R.179
Ligand excluded by PLIPEDO.126: 6 residues within 4Å:- Chain L: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.127: 4 residues within 4Å:- Chain L: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.128: 10 residues within 4Å:- Chain L: P.120, Y.121, Q.146, N.150
- Chain R: P.120, Y.121, Q.146, V.149, N.150
- Ligands: EDO.194
Ligand excluded by PLIPEDO.129: 6 residues within 4Å:- Chain L: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.130: 3 residues within 4Å:- Chain L: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.131: 5 residues within 4Å:- Chain L: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.132: 5 residues within 4Å:- Chain C: N.96, F.98, Q.183
- Chain L: F.101, R.179
Ligand excluded by PLIPEDO.137: 6 residues within 4Å:- Chain M: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.138: 4 residues within 4Å:- Chain M: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.139: 10 residues within 4Å:- Chain A: P.120, Y.121, Q.146, V.149, N.150
- Chain M: P.120, Y.121, Q.146, N.150
- Ligands: EDO.7
Ligand excluded by PLIPEDO.140: 6 residues within 4Å:- Chain M: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.141: 3 residues within 4Å:- Chain M: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.142: 5 residues within 4Å:- Chain M: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.143: 5 residues within 4Å:- Chain M: F.101, R.179
- Chain T: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.148: 6 residues within 4Å:- Chain N: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.149: 4 residues within 4Å:- Chain N: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.150: 10 residues within 4Å:- Chain B: P.120, Y.121, Q.146, V.149, N.150
- Chain N: P.120, Y.121, Q.146, N.150
- Ligands: EDO.18
Ligand excluded by PLIPEDO.151: 6 residues within 4Å:- Chain N: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.152: 3 residues within 4Å:- Chain N: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.153: 5 residues within 4Å:- Chain N: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.154: 5 residues within 4Å:- Chain N: F.101, R.179
- Chain R: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.159: 6 residues within 4Å:- Chain O: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.160: 4 residues within 4Å:- Chain O: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.161: 10 residues within 4Å:- Chain D: P.120, Y.121, Q.146, V.149, N.150
- Chain O: P.120, Y.121, Q.146, N.150
- Ligands: EDO.40
Ligand excluded by PLIPEDO.162: 6 residues within 4Å:- Chain O: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.163: 3 residues within 4Å:- Chain O: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.164: 5 residues within 4Å:- Chain O: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.165: 5 residues within 4Å:- Chain O: F.101, R.179
- Chain Q: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.170: 6 residues within 4Å:- Chain P: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.171: 4 residues within 4Å:- Chain P: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.172: 10 residues within 4Å:- Chain C: P.120, Y.121, Q.146, V.149, N.150
- Chain P: P.120, Y.121, Q.146, N.150
- Ligands: EDO.29
Ligand excluded by PLIPEDO.173: 6 residues within 4Å:- Chain P: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.174: 3 residues within 4Å:- Chain P: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.175: 5 residues within 4Å:- Chain P: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.176: 5 residues within 4Å:- Chain P: F.101, R.179
- Chain S: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.181: 6 residues within 4Å:- Chain Q: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.182: 4 residues within 4Å:- Chain Q: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.183: 10 residues within 4Å:- Chain K: P.120, Y.121, Q.146, V.149, N.150
- Chain Q: P.120, Y.121, Q.146, N.150
- Ligands: EDO.117
Ligand excluded by PLIPEDO.184: 6 residues within 4Å:- Chain Q: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.185: 3 residues within 4Å:- Chain Q: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.186: 5 residues within 4Å:- Chain Q: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.187: 5 residues within 4Å:- Chain Q: F.101, R.179
- Chain X: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.192: 6 residues within 4Å:- Chain R: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.193: 4 residues within 4Å:- Chain R: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.194: 10 residues within 4Å:- Chain L: P.120, Y.121, Q.146, V.149, N.150
- Chain R: P.120, Y.121, Q.146, N.150
- Ligands: EDO.128
Ligand excluded by PLIPEDO.195: 6 residues within 4Å:- Chain R: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.196: 3 residues within 4Å:- Chain R: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.197: 5 residues within 4Å:- Chain R: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.198: 5 residues within 4Å:- Chain R: F.101, R.179
- Chain V: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.203: 6 residues within 4Å:- Chain S: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.204: 4 residues within 4Å:- Chain S: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.205: 10 residues within 4Å:- Chain J: P.120, Y.121, Q.146, V.149, N.150
- Chain S: P.120, Y.121, Q.146, N.150
- Ligands: EDO.106
Ligand excluded by PLIPEDO.206: 6 residues within 4Å:- Chain S: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.207: 3 residues within 4Å:- Chain S: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.208: 5 residues within 4Å:- Chain S: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.209: 5 residues within 4Å:- Chain S: F.101, R.179
- Chain U: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.214: 6 residues within 4Å:- Chain T: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.215: 4 residues within 4Å:- Chain T: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.216: 10 residues within 4Å:- Chain I: P.120, Y.121, Q.146, V.149, N.150
- Chain T: P.120, Y.121, Q.146, N.150
- Ligands: EDO.95
Ligand excluded by PLIPEDO.217: 6 residues within 4Å:- Chain T: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.218: 3 residues within 4Å:- Chain T: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.219: 5 residues within 4Å:- Chain T: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.220: 5 residues within 4Å:- Chain T: F.101, R.179
- Chain W: N.96, F.98, Q.183
Ligand excluded by PLIPEDO.225: 6 residues within 4Å:- Chain U: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.226: 4 residues within 4Å:- Chain U: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.227: 10 residues within 4Å:- Chain H: P.120, Y.121, Q.146, V.149, N.150
- Chain U: P.120, Y.121, Q.146, N.150
- Ligands: EDO.84
Ligand excluded by PLIPEDO.228: 6 residues within 4Å:- Chain U: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.229: 3 residues within 4Å:- Chain U: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.230: 5 residues within 4Å:- Chain U: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.231: 5 residues within 4Å:- Chain P: N.96, F.98, Q.183
- Chain U: F.101, R.179
Ligand excluded by PLIPEDO.236: 6 residues within 4Å:- Chain V: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.237: 4 residues within 4Å:- Chain V: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.238: 10 residues within 4Å:- Chain G: P.120, Y.121, Q.146, V.149, N.150
- Chain V: P.120, Y.121, Q.146, N.150
- Ligands: EDO.73
Ligand excluded by PLIPEDO.239: 6 residues within 4Å:- Chain V: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.240: 3 residues within 4Å:- Chain V: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.241: 5 residues within 4Å:- Chain V: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.242: 5 residues within 4Å:- Chain N: N.96, F.98, Q.183
- Chain V: F.101, R.179
Ligand excluded by PLIPEDO.247: 6 residues within 4Å:- Chain W: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.248: 4 residues within 4Å:- Chain W: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.249: 10 residues within 4Å:- Chain E: P.120, Y.121, Q.146, V.149, N.150
- Chain W: P.120, Y.121, Q.146, N.150
- Ligands: EDO.51
Ligand excluded by PLIPEDO.250: 6 residues within 4Å:- Chain W: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.251: 3 residues within 4Å:- Chain W: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.252: 5 residues within 4Å:- Chain W: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.253: 5 residues within 4Å:- Chain M: N.96, F.98, Q.183
- Chain W: F.101, R.179
Ligand excluded by PLIPEDO.258: 6 residues within 4Å:- Chain X: N.21, V.22, S.23, R.61, A.62, T.63
Ligand excluded by PLIPEDO.259: 4 residues within 4Å:- Chain X: S.34, D.35, S.36, D.48
Ligand excluded by PLIPEDO.260: 10 residues within 4Å:- Chain F: P.120, Y.121, Q.146, V.149, N.150
- Chain X: P.120, Y.121, Q.146, N.150
- Ligands: EDO.62
Ligand excluded by PLIPEDO.261: 6 residues within 4Å:- Chain X: R.9, D.29, K.93, G.94, I.95, S.187
Ligand excluded by PLIPEDO.262: 3 residues within 4Å:- Chain X: N.125, E.127, Q.160
Ligand excluded by PLIPEDO.263: 5 residues within 4Å:- Chain X: L.126, E.127, I.128, T.138, Q.139
Ligand excluded by PLIPEDO.264: 5 residues within 4Å:- Chain O: N.96, F.98, Q.183
- Chain X: F.101, R.179
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bisson, C. et al., Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide. Angew.Chem.Int.Ed.Engl. (2016)
- Release Date
- 2016-10-05
- Peptides
- Imidazoleglycerol-phosphate dehydratase 2, chloroplastic: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.10 Å
- Oligo State
- homo-24-mer
- Ligands
- 48 x MN: MANGANESE (II) ION(Non-covalent)
- 24 x 5DL: [(2S)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]phosphonic acid(Non-covalent)
- 24 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 168 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bisson, C. et al., Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide. Angew.Chem.Int.Ed.Engl. (2016)
- Release Date
- 2016-10-05
- Peptides
- Imidazoleglycerol-phosphate dehydratase 2, chloroplastic: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A