SMTL ID : 5enr.1

MBX3135 bound structure of bacterial efflux pump.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-3-3-mer

Ligands

1 x MBX: ~{N}-[4-[2-[[5-cyano-8-[(2~{S},6~{S})-2,6-dimethylmorpholin-4-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridin-6-yl]sulfanyl]ethyl]phenyl]prop-2-enamide(Non-covalent)

MBX.1: 15 residues within 4Å: Chain C: F.98, V.101, F.140, G.141, I.239, A.241, A.248, S.249, P.288, Y.289, M.313, F.350, V.352, F.355, F.368 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:F.98, C:F.140, C:F.140, C:F.140, C:I.239, C:A.241, C:Y.289, C:V.352, C:F.355, C:F.368 Water bridges: C:F.140, C:A.241, C:A.248, C:S.249 pi-Stacking: C:F.368

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sjuts, H. et al., Molecular basis for inhibition of AcrB multidrug efflux pump by novel and powerful pyranopyridine derivatives. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-04-06

Peptides

Multidrug efflux pump subunit AcrB,Multidrug efflux pump subunit AcrB: ABC
DARPin: DEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Multidrug efflux pump subunit AcrB,Multidrug efflux pump subunit AcrB

DARPin

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