SMTL ID : 5fso.1

MTH1 substrate recognition: Complex with a methylaminopyrimidinedione.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: L.64, H.65, K.66 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.65 Hydrogen bonds: A:K.66 Salt bridges: A:K.66

1 x S76: 6-(METHYLAMINO)-1H-PYRIMIDINE-2,4-DIONE(Non-covalent)

S76.2: 9 residues within 4Å: Chain A: L.9, N.33, F.72, F.74, W.117, D.119, D.120, W.123 Ligands: DMS.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.33, A:N.33, A:D.119, A:D.119 pi-Stacking: A:W.117

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 6 residues within 4Å: Chain A: Y.7, T.8, L.9, G.36, G.37 Ligands: S76.2 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.33, A:G.36 DMS.4: 3 residues within 4Å: Chain A: Y.148, T.149, L.150 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nissink, J.W. et al., MTH1 Substrate Recognition--An Example of Specific Promiscuity. PLoS ONE (2016)

Release Date

2017-01-18

Peptides

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE

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