SMTL ID : 5g1x.1

Crystal structure of Aurora-A kinase in complex with N-Myc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 20 residues within 4Å: Chain A: L.21, G.22, K.23, G.24, K.25, V.29, A.42, K.44, L.76, L.92, E.93, Y.94, A.95, T.99, E.142, N.143, L.145, D.156 Ligands: MG.2, MG.3 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:K.25, A:E.93, A:A.95 Water bridges: A:K.23, A:K.23, A:F.26, A:K.44, A:T.99, A:T.99, A:E.142, A:E.142, A:N.143, A:N.143, A:D.156, A:D.156, A:D.156, A:D.156 Salt bridges: A:K.44, A:K.44

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: K.44, D.156 Ligands: ADP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.156, H2O.1, H2O.5, H2O.5, H2O.8 MG.3: 3 residues within 4Å: Chain A: N.143, D.156 Ligands: ADP.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.156, H2O.5, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Richards, M. et al., Structural Basis of N-Myc Binding by Aurora-A and its Destabilization by Kinase Inhibitors. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-11-16

Peptides

AURORA KINASE A: A
N-MYC PROTO-ONCOGENE PROTEIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AURORA KINASE A

N-MYC PROTO-ONCOGENE PROTEIN

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