SMTL ID : 5g45.1

Ligand complex of RORg LBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

hetero-1-1-mer

Ligands

1 x A7W: 8-AMINO-3-QUINOLINOL(Non-covalent)

A7W.1: 11 residues within 4Å: Chain A: M.122, A.125, Y.126, V.133, F.134, F.135, F.145, I.157, F.158, S.161 Ligands: DMS.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.133, A:V.133, A:F.145, A:I.157, A:F.158 Hydrogen bonds: A:S.161, A:S.161

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: C.123, Y.126, S.165 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.123 Water bridges: A:A.128

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 4 residues within 4Å: Chain A: H.80, F.135, E.136 Ligands: A7W.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.136 Water bridges: A:G.137 pi-Cation interactions: A:H.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xue, Y. et al., Fragment Screening of Rorgammat Using Cocktail Crystallography: Identification of Simultaneous Binding of Multiple Fragments. Chemmedchem (2016)

Release Date

2016-08-03

Peptides

NUCLEAR RECEPTOR ROR-GAMMA: A
RORG: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

NUCLEAR RECEPTOR ROR-GAMMA

RORG

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