SMTL ID : 5ggl.2 (1 other biounit)

Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GlcNAc-alpha-pNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.27 Å

Oligo State

monomer

Ligands

1 x 6ZC: 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside(Non-covalent)

6ZC.1: 7 residues within 4Å: Chain A: R.43, Y.66, D.93, E.94, W.120, R.121, W.148 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.120 Hydrogen bonds: A:R.43, A:R.121, A:W.148 Water bridges: A:D.93 Salt bridges: A:R.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuwabara, N. et al., Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-08-10

Peptides

Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

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