SMTL ID : 5xfc.1 (1 other biounit)

Serial femtosecond X-ray structure of a stem domain of human O-mannose beta-1,2-N-acetylglucosaminyltransferase solved by Se-SAD using XFEL (refined against 13,000 patterns)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x MBE: 4-nitrophenyl beta-D-mannopyranoside(Non-covalent)

MBE.1: 6 residues within 4Å: Chain A: R.43, Y.66, D.93, E.94, R.121, W.148 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.43, A:R.121, A:W.148 Salt bridges: A:R.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamashita, K. et al., Experimental phase determination with selenomethionine or mercury-derivatization in serial femtosecond crystallography. IUCrJ (2017)

Release Date

2017-08-30

Peptides

Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

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