SMTL ID : 5htz.2 (1 other biounit)

BACE1 in complex with (S)-5-(3-chloro-5-(5-(prop-1-yn-1-yl)pyridin-3-yl)thiophen-2-yl)-2,5-dimethyl-1,2,4-thiadiazinan-3-iminium 1,1-dioxide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 66J: (3E,5S)-5-{3-chloro-5-[5-(prop-1-yn-1-yl)pyridin-3-yl]thiophen-2-yl}-2,5-dimethyl-1,2,4-thiadiazinan-3-imine 1,1-dioxide(Non-covalent)

66J.1: 19 residues within 4Å: Chain A: S.29, Q.31, G.32, L.49, D.51, G.53, S.54, Y.90, Q.92, G.93, F.127, W.134, I.137, D.247, S.248, G.249, T.250, T.251, A.354 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.49, A:Y.90, A:I.137, A:A.354 Water bridges: A:Q.92, A:Q.92 Salt bridges: A:D.51, A:D.247 Halogen bonds: A:G.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, J.D. et al., Discovery of the 3-Imino-1,2,4-thiadiazinane 1,1-Dioxide Derivative Verubecestat (MK-8931)-A beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 Inhibitor for the Treatment of Alzheimer's Disease. J. Med. Chem. (2016)

Release Date

2016-11-09

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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