SMTL ID : 5hu1.2 (1 other biounit)

BACE1 in complex with (R)-N-(3-(3-amino-2,5-dimethyl-1,1-dioxido-5,6-dihydro-2H-1,2,4-thiadiazin-5-yl)-4-fluorophenyl)-5-fluoropicolinamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 66F: N-{3-[(5R)-3-amino-2,5-dimethyl-1,1-dioxido-5,6-dihydro-2H-1,2,4-thiadiazin-5-yl]-4-fluorophenyl}-5-fluoropyridine-2-carboxamide(Non-covalent)

66F.1: 20 residues within 4Å: Chain A: S.29, G.30, Q.31, G.32, L.49, D.51, G.53, S.54, Y.90, Q.92, F.127, I.129, W.134, I.137, D.247, S.248, G.249, T.250, T.251, A.354 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.90, A:F.127, A:I.129, A:I.137, A:I.137 Hydrogen bonds: A:Q.92, A:G.249 Water bridges: A:G.53 Salt bridges: A:D.51, A:D.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, J.D. et al., Discovery of the 3-Imino-1,2,4-thiadiazinane 1,1-Dioxide Derivative Verubecestat (MK-8931)-A beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 Inhibitor for the Treatment of Alzheimer's Disease. J. Med. Chem. (2016)

Release Date

2016-11-09

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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